Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.49■□□□□ 0.55
SPCS3P61009 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.49■□□□□ 0.55
SPCS3P61009 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.49■□□□□ 0.55
SPCS3P61009 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPCS3P61009 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.49■□□□□ 0.55
SPCS3P61009 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SPCS3P61009 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPCS3P61009 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPCS3P61009 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.48■□□□□ 0.55
SPCS3P61009 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPCS3P61009 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPCS3P61009 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPCS3P61009 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SPCS3P61009 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SPCS3P61009 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPCS3P61009 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.48■□□□□ 0.55
SPCS3P61009 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS3P61009 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS3P61009 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS3P61009 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
SPCS3P61009 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS3P61009 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS3P61009 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPCS3P61009 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.47■□□□□ 0.55
SPCS3P61009 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.46■□□□□ 0.55
SPCS3P61009 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.46■□□□□ 0.55
SPCS3P61009 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.46■□□□□ 0.55
SPCS3P61009 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SPCS3P61009 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SPCS3P61009 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPCS3P61009 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SPCS3P61009 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
SPCS3P61009 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SPCS3P61009 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SPCS3P61009 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SPCS3P61009 C9orf163-202ENST00000624034 2573 ntBASIC18.45■□□□□ 0.54
SPCS3P61009 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS3P61009 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS3P61009 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SPCS3P61009 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS3P61009 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS3P61009 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.45■□□□□ 0.54
SPCS3P61009 AL161729.1-201ENST00000604104 1402 ntBASIC18.45■□□□□ 0.54
SPCS3P61009 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPCS3P61009 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.45■□□□□ 0.54
SPCS3P61009 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.45■□□□□ 0.54
SPCS3P61009 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SPCS3P61009 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS3P61009 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.44■□□□□ 0.54
SPCS3P61009 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS3P61009 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS3P61009 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS3P61009 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS3P61009 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.44■□□□□ 0.54
SPCS3P61009 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.44■□□□□ 0.54
SPCS3P61009 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.44■□□□□ 0.54
SPCS3P61009 GPX1-201ENST00000419349 1106 ntBASIC18.44■□□□□ 0.54
SPCS3P61009 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SPCS3P61009 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.44■□□□□ 0.54
SPCS3P61009 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS3P61009 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS3P61009 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPCS3P61009 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPCS3P61009 AC090877.2-201ENST00000558441 1738 ntBASIC18.43■□□□□ 0.54
SPCS3P61009 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPCS3P61009 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPCS3P61009 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPCS3P61009 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SPCS3P61009 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.43■□□□□ 0.54
SPCS3P61009 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SPCS3P61009 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPCS3P61009 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.43■□□□□ 0.54
SPCS3P61009 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPCS3P61009 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
SPCS3P61009 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS3P61009 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS3P61009 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS3P61009 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS3P61009 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS3P61009 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
SPCS3P61009 AC133552.2-201ENST00000619106 1032 ntBASIC18.42■□□□□ 0.54
SPCS3P61009 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPCS3P61009 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SPCS3P61009 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.42■□□□□ 0.54
SPCS3P61009 AC009831.1-201ENST00000580420 1582 ntBASIC18.42■□□□□ 0.54
SPCS3P61009 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS3P61009 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPCS3P61009 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms