Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 GMC1YDR506C 1827 nt4.92□□□□□ -1.62
YNL040WP53960 PSY4YBL046W 1326 nt4.92□□□□□ -1.62
YNL040WP53960 NOP2YNL061W 1857 nt4.92□□□□□ -1.62
YNL040WP53960 RRP3YHR065C 1506 nt4.92□□□□□ -1.62
YNL040WP53960 FOB1YDR110W 1701 nt4.92□□□□□ -1.62
YNL040WP53960 JAC1YGL018C 555 nt4.91□□□□□ -1.62
YNL040WP53960 REV7YIL139C 738 nt4.91□□□□□ -1.62
YNL040WP53960 CCZ1YBR131W 2115 nt4.91□□□□□ -1.62
YNL040WP53960 HXT7YDR342C 1713 nt4.91□□□□□ -1.62
YNL040WP53960 HXT6YDR343C 1713 nt4.91□□□□□ -1.62
YNL040WP53960 BOP2YLR267W 1713 nt4.91□□□□□ -1.62
YNL040WP53960 EEB1YPL095C 1371 nt4.91□□□□□ -1.62
YNL040WP53960 VAN1YML115C 1608 nt4.9□□□□□ -1.62
YNL040WP53960 NTH2YBR001C 2343 nt4.9□□□□□ -1.62
YNL040WP53960 CAB4YGR277C 918 nt4.9□□□□□ -1.63
YNL040WP53960 YAR019W-AYAR019W-A 333 nt4.9□□□□□ -1.63
YNL040WP53960 MRPL4YLR439W 960 nt4.9□□□□□ -1.63
YNL040WP53960 BUD7YOR299W 2241 nt4.9□□□□□ -1.63
YNL040WP53960 KAR2YJL034W 2049 nt4.9□□□□□ -1.63
YNL040WP53960 FHL1YPR104C 2811 nt4.9□□□□□ -1.63
YNL040WP53960 YGR125WYGR125W 3111 nt4.9□□□□□ -1.63
YNL040WP53960 HXT5YHR096C 1779 nt4.89□□□□□ -1.63
YNL040WP53960 YEL045CYEL045C 426 nt4.89□□□□□ -1.63
YNL040WP53960 ECT1YGR007W 972 nt4.89□□□□□ -1.63
YNL040WP53960 COX17YLL009C 210 nt4.89□□□□□ -1.63
YNL040WP53960 APS1YLR170C 471 nt4.89□□□□□ -1.63
YNL040WP53960 YCL021W-AYCL021W-A 378 nt4.89□□□□□ -1.63
YNL040WP53960 KAP114YGL241W 3015 nt4.88□□□□□ -1.63
YNL040WP53960 SIF2YBR103W 1608 nt4.88□□□□□ -1.63
YNL040WP53960 SPT3YDR392W 1014 nt4.88□□□□□ -1.63
YNL040WP53960 YML131WYML131W 1098 nt4.88□□□□□ -1.63
YNL040WP53960 GSP2YOR185C 663 nt4.88□□□□□ -1.63
YNL040WP53960 YPL191CYPL191C 1083 nt4.88□□□□□ -1.63
YNL040WP53960 SUP35YDR172W 2058 nt4.88□□□□□ -1.63
YNL040WP53960 SEG2YKL105C 3399 nt4.87□□□□□ -1.63
YNL040WP53960 BNS1YGR230W 414 nt4.87□□□□□ -1.63
YNL040WP53960 ARP1YHR129C 1155 nt4.87□□□□□ -1.63
YNL040WP53960 YBL006W-AYBL006W-A 150 nt4.87□□□□□ -1.63
YNL040WP53960 MRPL39YML009C 213 nt4.87□□□□□ -1.63
YNL040WP53960 PDR16YNL231C 1056 nt4.87□□□□□ -1.63
YNL040WP53960 RDL1YOR285W 420 nt4.87□□□□□ -1.63
YNL040WP53960 MAK3YPR051W 531 nt4.87□□□□□ -1.63
YNL040WP53960 YPR169W-AYPR169W-A 219 nt4.87□□□□□ -1.63
YNL040WP53960 YPR170W-BYPR170W-B 258 nt4.87□□□□□ -1.63
YNL040WP53960 PEX32YBR168W 1242 nt4.87□□□□□ -1.63
YNL040WP53960 RAD30YDR419W 1899 nt4.87□□□□□ -1.63
YNL040WP53960 SYP1YCR030C 2613 nt4.87□□□□□ -1.63
YNL040WP53960 LUC7YDL087C 786 nt4.86□□□□□ -1.63
YNL040WP53960 CAB1YDR531W 1104 nt4.86□□□□□ -1.63
YNL040WP53960 SUT1YGL162W 900 nt4.86□□□□□ -1.63
YNL040WP53960 YHR145CYHR145C 357 nt4.86□□□□□ -1.63
YNL040WP53960 RPL43BYJR094W-A 279 nt4.86□□□□□ -1.63
YNL040WP53960 EUG1YDR518W 1554 nt4.86□□□□□ -1.63
YNL040WP53960 CNM67YNL225C 1746 nt4.86□□□□□ -1.63
YNL040WP53960 YDL027CYDL027C 1263 nt4.85□□□□□ -1.63
YNL040WP53960 SLZ1YNL196C 897 nt4.85□□□□□ -1.63
YNL040WP53960 ARG8YOL140W 1272 nt4.85□□□□□ -1.63
YNL040WP53960 CDC21YOR074C 915 nt4.85□□□□□ -1.63
YNL040WP53960 APM4YOL062C 1476 nt4.85□□□□□ -1.63
YNL040WP53960 AIM10YER087W 1731 nt4.85□□□□□ -1.63
YNL040WP53960 PMA1YGL008C 2757 nt4.85□□□□□ -1.63
YNL040WP53960 SDA1YGR245C 2304 nt4.84□□□□□ -1.63
YNL040WP53960 APC4YDR118W 1959 nt4.84□□□□□ -1.63
YNL040WP53960 ATG18YFR021W 1503 nt4.84□□□□□ -1.63
YNL040WP53960 SEC17YBL050W 879 nt4.84□□□□□ -1.63
YNL040WP53960 NUP116YMR047C 3342 nt4.84□□□□□ -1.63
YNL040WP53960 SWI3YJL176C 2478 nt4.83□□□□□ -1.64
YNL040WP53960 PCT1YGR202C 1275 nt4.83□□□□□ -1.64
YNL040WP53960 MNN11YJL183W 1269 nt4.83□□□□□ -1.64
YNL040WP53960 GAT3YLR013W 426 nt4.83□□□□□ -1.64
YNL040WP53960 YIF1YNL263C 945 nt4.83□□□□□ -1.64
YNL040WP53960 MGR2YPL098C 342 nt4.83□□□□□ -1.64
YNL040WP53960 PZF1YPR186C 1290 nt4.83□□□□□ -1.64
YNL040WP53960 CPS1YJL172W 1731 nt4.83□□□□□ -1.64
YNL040WP53960 BLM10YFL007W 6432 nt4.83□□□□□ -1.64
YNL040WP53960 YMR196WYMR196W 3267 nt4.82□□□□□ -1.64
YNL040WP53960 FUM1YPL262W 1467 nt4.82□□□□□ -1.64
YNL040WP53960 MLF3YNL074C 1359 nt4.82□□□□□ -1.64
YNL040WP53960 RBA50YDR527W 1320 nt4.82□□□□□ -1.64
YNL040WP53960 SSB2YNL209W 1842 nt4.82□□□□□ -1.64
YNL040WP53960 CPR6YLR216C 1116 nt4.82□□□□□ -1.64
YNL040WP53960 YMR135W-AYMR135W-A 534 nt4.82□□□□□ -1.64
YNL040WP53960 YIM1YMR152W 1098 nt4.82□□□□□ -1.64
YNL040WP53960 AIF1YNR074C 1137 nt4.82□□□□□ -1.64
YNL040WP53960 UBA3YPR066W 900 nt4.82□□□□□ -1.64
YNL040WP53960 YPR109WYPR109W 885 nt4.82□□□□□ -1.64
YNL040WP53960 RTC5YOR118W 1704 nt4.82□□□□□ -1.64
YNL040WP53960 MET7YOR241W 1647 nt4.82□□□□□ -1.64
YNL040WP53960 PRM1YNL279W 1986 nt4.82□□□□□ -1.64
YNL040WP53960 PAN1YIR006C 4443 nt4.81□□□□□ -1.64
YNL040WP53960 SWP1YMR149W 861 nt4.81□□□□□ -1.64
YNL040WP53960 SEC39YLR440C 2130 nt4.81□□□□□ -1.64
YNL040WP53960 TUB3YML124C 1338 nt4.8□□□□□ -1.64
YNL040WP53960 SRV2YNL138W 1581 nt4.8□□□□□ -1.64
YNL040WP53960 SNF11YDR073W 510 nt4.8□□□□□ -1.64
YNL040WP53960 CAX4YGR036C 720 nt4.8□□□□□ -1.64
YNL040WP53960 DCD1YHR144C 939 nt4.8□□□□□ -1.64
YNL040WP53960 YMR105W-AYMR105W-A 195 nt4.8□□□□□ -1.64
YNL040WP53960 ATG14YBR128C 1035 nt4.8□□□□□ -1.64
YNL040WP53960 RRB1YMR131C 1536 nt4.8□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 27.3 ms