Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC009086.3-201ENST00000623486 1008 ntBASIC23.12■■□□□ 1.29
NUBP1P53384 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NUBP1P53384 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
NUBP1P53384 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
NUBP1P53384 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.11■■□□□ 1.29
NUBP1P53384 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.11■■□□□ 1.29
NUBP1P53384 IGHV3-19-201ENST00000521488 291 ntBASIC23.11■■□□□ 1.29
NUBP1P53384 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.11■■□□□ 1.29
NUBP1P53384 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
NUBP1P53384 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NUBP1P53384 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.11■■□□□ 1.29
NUBP1P53384 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
NUBP1P53384 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUBP1P53384 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUBP1P53384 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.1■■□□□ 1.29
NUBP1P53384 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.1■■□□□ 1.29
NUBP1P53384 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUBP1P53384 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.1■■□□□ 1.29
NUBP1P53384 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUBP1P53384 DRD5P2-201ENST00000421395 2012 ntBASIC23.09■■□□□ 1.29
NUBP1P53384 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.09■■□□□ 1.29
NUBP1P53384 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.09■■□□□ 1.29
NUBP1P53384 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NUBP1P53384 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NUBP1P53384 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NUBP1P53384 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
NUBP1P53384 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
NUBP1P53384 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.08■■□□□ 1.29
NUBP1P53384 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
NUBP1P53384 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
NUBP1P53384 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NUBP1P53384 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
NUBP1P53384 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NUBP1P53384 CDCA4P2-201ENST00000441182 718 ntBASIC23.07■■□□□ 1.28
NUBP1P53384 AC026185.1-201ENST00000445748 174 ntBASIC23.07■■□□□ 1.28
NUBP1P53384 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NUBP1P53384 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.07■■□□□ 1.28
NUBP1P53384 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
NUBP1P53384 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NUBP1P53384 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.06■■□□□ 1.28
NUBP1P53384 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.06■■□□□ 1.28
NUBP1P53384 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
NUBP1P53384 AC006455.2-201ENST00000429931 906 ntBASIC23.06■■□□□ 1.28
NUBP1P53384 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.06■■□□□ 1.28
NUBP1P53384 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.06■■□□□ 1.28
NUBP1P53384 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.06■■□□□ 1.28
NUBP1P53384 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NUBP1P53384 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
NUBP1P53384 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NUBP1P53384 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NUBP1P53384 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
NUBP1P53384 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NUBP1P53384 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.05■■□□□ 1.28
NUBP1P53384 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.05■■□□□ 1.28
NUBP1P53384 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.05■■□□□ 1.28
NUBP1P53384 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.05■■□□□ 1.28
NUBP1P53384 MIR6084-201ENST00000622012 110 ntBASIC23.05■■□□□ 1.28
NUBP1P53384 AC073111.5-205ENST00000641717 521 ntBASIC23.05■■□□□ 1.28
NUBP1P53384 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NUBP1P53384 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
NUBP1P53384 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NUBP1P53384 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NUBP1P53384 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.04■■□□□ 1.28
NUBP1P53384 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.04■■□□□ 1.28
NUBP1P53384 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NUBP1P53384 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NUBP1P53384 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NUBP1P53384 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NUBP1P53384 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
NUBP1P53384 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.03■■□□□ 1.28
NUBP1P53384 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NUBP1P53384 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.03■■□□□ 1.28
NUBP1P53384 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.03■■□□□ 1.28
NUBP1P53384 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.03■■□□□ 1.28
NUBP1P53384 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.02■■□□□ 1.28
NUBP1P53384 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.02■■□□□ 1.28
NUBP1P53384 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NUBP1P53384 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
NUBP1P53384 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
NUBP1P53384 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.02■■□□□ 1.28
NUBP1P53384 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NUBP1P53384 AL109923.1-201ENST00000618799 583 ntBASIC23.02■■□□□ 1.28
NUBP1P53384 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.02■■□□□ 1.28
NUBP1P53384 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.01■■□□□ 1.27
NUBP1P53384 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NUBP1P53384 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NUBP1P53384 LINC01003-201ENST00000564834 1764 ntBASIC23.01■■□□□ 1.27
NUBP1P53384 AP004609.3-201ENST00000610705 1884 ntBASIC23.01■■□□□ 1.27
NUBP1P53384 AC016769.1-201ENST00000409132 1010 ntBASIC23.01■■□□□ 1.27
NUBP1P53384 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
NUBP1P53384 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.01■■□□□ 1.27
NUBP1P53384 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NUBP1P53384 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.01■■□□□ 1.27
NUBP1P53384 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
NUBP1P53384 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.01■■□□□ 1.27
NUBP1P53384 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NUBP1P53384 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
NUBP1P53384 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NUBP1P53384 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23■■□□□ 1.27
NUBP1P53384 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms