Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.06■■□□□ 1.12
CLCN2P51788 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN2P51788 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN2P51788 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLCN2P51788 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLCN2P51788 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLCN2P51788 AL024507.2-201ENST00000606070 2574 ntBASIC22.04■■□□□ 1.12
CLCN2P51788 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN2P51788 AL592295.1-201ENST00000400984 884 ntBASIC22.04■■□□□ 1.12
CLCN2P51788 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.04■■□□□ 1.12
CLCN2P51788 AC103724.3-201ENST00000564481 992 ntBASIC22.04■■□□□ 1.12
CLCN2P51788 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN2P51788 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.04■■□□□ 1.12
CLCN2P51788 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN2P51788 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
CLCN2P51788 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN2P51788 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN2P51788 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.04■■□□□ 1.12
CLCN2P51788 AC137767.1-201ENST00000602918 1920 ntBASIC22.04■■□□□ 1.12
CLCN2P51788 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCN2P51788 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CLCN2P51788 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
CLCN2P51788 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN2P51788 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN2P51788 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN2P51788 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CLCN2P51788 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.03■■□□□ 1.12
CLCN2P51788 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CLCN2P51788 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN2P51788 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.03■■□□□ 1.12
CLCN2P51788 AL031848.2-201ENST00000607670 837 ntBASIC22.03■■□□□ 1.12
CLCN2P51788 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.03■■□□□ 1.12
CLCN2P51788 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN2P51788 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCN2P51788 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN2P51788 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCN2P51788 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN2P51788 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CLCN2P51788 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.02■■□□□ 1.12
CLCN2P51788 AL451085.2-201ENST00000605085 799 ntBASIC22.02■■□□□ 1.12
CLCN2P51788 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CLCN2P51788 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN2P51788 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CLCN2P51788 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCN2P51788 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN2P51788 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN2P51788 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN2P51788 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CLCN2P51788 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.01■■□□□ 1.11
CLCN2P51788 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN2P51788 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN2P51788 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN2P51788 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN2P51788 LINC00565-201ENST00000562710 2331 ntBASIC22.01■■□□□ 1.11
CLCN2P51788 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCN2P51788 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN2P51788 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLCN2P51788 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN2P51788 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CLCN2P51788 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN2P51788 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22■■□□□ 1.11
CLCN2P51788 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22■■□□□ 1.11
CLCN2P51788 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN2P51788 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN2P51788 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22■■□□□ 1.11
CLCN2P51788 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCN2P51788 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN2P51788 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CLCN2P51788 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN2P51788 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.99■■□□□ 1.11
CLCN2P51788 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN2P51788 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN2P51788 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCN2P51788 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
CLCN2P51788 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.98■■□□□ 1.11
CLCN2P51788 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.98■■□□□ 1.11
CLCN2P51788 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CLCN2P51788 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.98■■□□□ 1.11
CLCN2P51788 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
CLCN2P51788 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN2P51788 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.98■■□□□ 1.11
CLCN2P51788 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.98■■□□□ 1.11
CLCN2P51788 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN2P51788 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN2P51788 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN2P51788 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLCN2P51788 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN2P51788 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN2P51788 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN2P51788 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCN2P51788 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CLCN2P51788 AC127496.7-201ENST00000625110 1798 ntBASIC21.97■■□□□ 1.11
CLCN2P51788 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN2P51788 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLCN2P51788 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN2P51788 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.96■■□□□ 1.11
CLCN2P51788 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCN2P51788 KRT18P24-201ENST00000344739 1156 ntBASIC21.96■■□□□ 1.11
CLCN2P51788 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.96■■□□□ 1.11
CLCN2P51788 AL035685.1-201ENST00000636663 812 ntBASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms