Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB5CP51148 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5CP51148 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5CP51148 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB5CP51148 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RAB5CP51148 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
RAB5CP51148 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5CP51148 RNF165-205ENST00000588679 2904 ntBASIC18.39■□□□□ 0.53
RAB5CP51148 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5CP51148 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB5CP51148 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB5CP51148 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB5CP51148 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.39■□□□□ 0.53
RAB5CP51148 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5CP51148 AC005559.1-201ENST00000589661 871 ntBASIC18.39■□□□□ 0.53
RAB5CP51148 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5CP51148 AC092068.2-201ENST00000590491 1708 ntBASIC18.39■□□□□ 0.53
RAB5CP51148 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5CP51148 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5CP51148 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RAB5CP51148 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5CP51148 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5CP51148 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5CP51148 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB5CP51148 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.38■□□□□ 0.53
RAB5CP51148 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5CP51148 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5CP51148 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB5CP51148 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5CP51148 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5CP51148 AL359504.2-201ENST00000605506 1601 ntBASIC18.38■□□□□ 0.53
RAB5CP51148 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5CP51148 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5CP51148 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5CP51148 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5CP51148 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5CP51148 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5CP51148 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB5CP51148 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5CP51148 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB5CP51148 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RAB5CP51148 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB5CP51148 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5CP51148 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB5CP51148 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5CP51148 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5CP51148 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5CP51148 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RAB5CP51148 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5CP51148 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5CP51148 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5CP51148 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5CP51148 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5CP51148 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5CP51148 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5CP51148 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5CP51148 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB5CP51148 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB5CP51148 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB5CP51148 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5CP51148 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5CP51148 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB5CP51148 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5CP51148 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5CP51148 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5CP51148 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB5CP51148 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5CP51148 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5CP51148 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5CP51148 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5CP51148 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5CP51148 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB5CP51148 AC242852.2-201ENST00000615738 1807 ntBASIC18.33■□□□□ 0.53
RAB5CP51148 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB5CP51148 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RAB5CP51148 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB5CP51148 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB5CP51148 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB5CP51148 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB5CP51148 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5CP51148 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5CP51148 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB5CP51148 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAB5CP51148 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5CP51148 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5CP51148 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB5CP51148 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB5CP51148 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5CP51148 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAB5CP51148 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB5CP51148 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5CP51148 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RAB5CP51148 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5CP51148 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5CP51148 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5CP51148 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5CP51148 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB5CP51148 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB5CP51148 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5CP51148 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms