Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
HADHAP40939 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HADHAP40939 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HADHAP40939 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
HADHAP40939 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HADHAP40939 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HADHAP40939 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.08■■□□□ 1.29
HADHAP40939 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
HADHAP40939 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
HADHAP40939 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
HADHAP40939 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HADHAP40939 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.07■■□□□ 1.28
HADHAP40939 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.07■■□□□ 1.28
HADHAP40939 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.07■■□□□ 1.28
HADHAP40939 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
HADHAP40939 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HADHAP40939 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HADHAP40939 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HADHAP40939 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.06■■□□□ 1.28
HADHAP40939 AL022069.1-201ENST00000568025 1636 ntBASIC23.06■■□□□ 1.28
HADHAP40939 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
HADHAP40939 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HADHAP40939 AF131216.4-201ENST00000638924 1588 ntBASIC23.06■■□□□ 1.28
HADHAP40939 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.05■■□□□ 1.28
HADHAP40939 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
HADHAP40939 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HADHAP40939 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.05■■□□□ 1.28
HADHAP40939 RARRES2P1-201ENST00000474487 481 ntBASIC23.05■■□□□ 1.28
HADHAP40939 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
HADHAP40939 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.05■■□□□ 1.28
HADHAP40939 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.05■■□□□ 1.28
HADHAP40939 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.05■■□□□ 1.28
HADHAP40939 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HADHAP40939 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HADHAP40939 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
HADHAP40939 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HADHAP40939 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
HADHAP40939 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HADHAP40939 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.04■■□□□ 1.28
HADHAP40939 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
HADHAP40939 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HADHAP40939 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.04■■□□□ 1.28
HADHAP40939 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
HADHAP40939 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.03■■□□□ 1.28
HADHAP40939 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HADHAP40939 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HADHAP40939 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HADHAP40939 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HADHAP40939 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HADHAP40939 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HADHAP40939 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HADHAP40939 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HADHAP40939 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HADHAP40939 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HADHAP40939 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HADHAP40939 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HADHAP40939 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.02■■□□□ 1.28
HADHAP40939 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HADHAP40939 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.02■■□□□ 1.28
HADHAP40939 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.02■■□□□ 1.28
HADHAP40939 AC137630.3-201ENST00000607245 391 ntBASIC23.02■■□□□ 1.28
HADHAP40939 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HADHAP40939 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.02■■□□□ 1.28
HADHAP40939 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HADHAP40939 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.02■■□□□ 1.28
HADHAP40939 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.01■■□□□ 1.27
HADHAP40939 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.01■■□□□ 1.27
HADHAP40939 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.01■■□□□ 1.27
HADHAP40939 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
HADHAP40939 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HADHAP40939 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
HADHAP40939 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23■■□□□ 1.27
HADHAP40939 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23■■□□□ 1.27
HADHAP40939 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23■■□□□ 1.27
HADHAP40939 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23■■□□□ 1.27
HADHAP40939 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HADHAP40939 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23■■□□□ 1.27
HADHAP40939 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
HADHAP40939 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23■■□□□ 1.27
HADHAP40939 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
HADHAP40939 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HADHAP40939 AC068473.5-201ENST00000616428 2072 ntBASIC22.99■■□□□ 1.27
HADHAP40939 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
HADHAP40939 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
HADHAP40939 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.98■■□□□ 1.27
HADHAP40939 AC131274.2-201ENST00000580697 1507 ntBASIC22.98■■□□□ 1.27
HADHAP40939 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.98■■□□□ 1.27
HADHAP40939 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.98■■□□□ 1.27
HADHAP40939 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HADHAP40939 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms