Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CEACAM3P40198 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.61■□□□□ 0.57
CEACAM3P40198 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.61■□□□□ 0.57
CEACAM3P40198 MTDHP2-201ENST00000601468 714 ntBASIC18.61■□□□□ 0.57
CEACAM3P40198 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CEACAM3P40198 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CEACAM3P40198 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CEACAM3P40198 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CEACAM3P40198 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.6■□□□□ 0.57
CEACAM3P40198 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CEACAM3P40198 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CEACAM3P40198 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CEACAM3P40198 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.6■□□□□ 0.57
CEACAM3P40198 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CEACAM3P40198 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.6■□□□□ 0.57
CEACAM3P40198 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.6■□□□□ 0.57
CEACAM3P40198 SNX5-217ENST00000606557 1087 ntBASIC18.6■□□□□ 0.57
CEACAM3P40198 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.6■□□□□ 0.57
CEACAM3P40198 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.6■□□□□ 0.57
CEACAM3P40198 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CEACAM3P40198 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CEACAM3P40198 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CEACAM3P40198 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CEACAM3P40198 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.59■□□□□ 0.57
CEACAM3P40198 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CEACAM3P40198 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CEACAM3P40198 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.59■□□□□ 0.57
CEACAM3P40198 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CEACAM3P40198 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.59■□□□□ 0.57
CEACAM3P40198 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.59■□□□□ 0.57
CEACAM3P40198 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CEACAM3P40198 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.59■□□□□ 0.57
CEACAM3P40198 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.59■□□□□ 0.57
CEACAM3P40198 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CEACAM3P40198 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CEACAM3P40198 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CEACAM3P40198 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.58■□□□□ 0.57
CEACAM3P40198 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CEACAM3P40198 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.58■□□□□ 0.57
CEACAM3P40198 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CEACAM3P40198 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CEACAM3P40198 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CEACAM3P40198 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CEACAM3P40198 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.58■□□□□ 0.56
CEACAM3P40198 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CEACAM3P40198 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.57■□□□□ 0.56
CEACAM3P40198 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.57■□□□□ 0.56
CEACAM3P40198 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CEACAM3P40198 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CEACAM3P40198 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.57■□□□□ 0.56
CEACAM3P40198 TSPY9P-201ENST00000440215 945 ntBASIC18.57■□□□□ 0.56
CEACAM3P40198 TSPY11P-201ENST00000442607 1045 ntBASIC18.57■□□□□ 0.56
CEACAM3P40198 MIR6722-201ENST00000617286 78 ntBASIC18.57■□□□□ 0.56
CEACAM3P40198 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CEACAM3P40198 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.57■□□□□ 0.56
CEACAM3P40198 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CEACAM3P40198 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CEACAM3P40198 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CEACAM3P40198 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.57■□□□□ 0.56
CEACAM3P40198 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CEACAM3P40198 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.57■□□□□ 0.56
CEACAM3P40198 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
CEACAM3P40198 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CEACAM3P40198 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CEACAM3P40198 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CEACAM3P40198 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CEACAM3P40198 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CEACAM3P40198 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CEACAM3P40198 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CEACAM3P40198 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CEACAM3P40198 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.56■□□□□ 0.56
CEACAM3P40198 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.56■□□□□ 0.56
CEACAM3P40198 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CEACAM3P40198 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CEACAM3P40198 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CEACAM3P40198 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CEACAM3P40198 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CEACAM3P40198 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CEACAM3P40198 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CEACAM3P40198 GUSBP5-201ENST00000418136 578 ntBASIC18.55■□□□□ 0.56
CEACAM3P40198 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.55■□□□□ 0.56
CEACAM3P40198 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.55■□□□□ 0.56
CEACAM3P40198 AC010997.5-201ENST00000609182 354 ntBASIC18.55■□□□□ 0.56
CEACAM3P40198 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CEACAM3P40198 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.54■□□□□ 0.56
CEACAM3P40198 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.54■□□□□ 0.56
CEACAM3P40198 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.54■□□□□ 0.56
CEACAM3P40198 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.54■□□□□ 0.56
CEACAM3P40198 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CEACAM3P40198 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms