Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 snR19snR19 568 nt4.82□□□□□ -1.64
TDA11P38854 PHO8YDR481C 1701 nt4.82□□□□□ -1.64
TDA11P38854 BUD22YMR014W 1560 nt4.82□□□□□ -1.64
TDA11P38854 VBA2YBR293W 1425 nt4.81□□□□□ -1.64
TDA11P38854 NOT3YIL038C 2511 nt4.81□□□□□ -1.64
TDA11P38854 IWR1YDL115C 1062 nt4.81□□□□□ -1.64
TDA11P38854 PRO3YER023W 861 nt4.81□□□□□ -1.64
TDA11P38854 TDH3YGR192C 999 nt4.81□□□□□ -1.64
TDA11P38854 YJL068CYJL068C 900 nt4.81□□□□□ -1.64
TDA11P38854 YJL215CYJL215C 360 nt4.81□□□□□ -1.64
TDA11P38854 YNR042WYNR042W 429 nt4.81□□□□□ -1.64
TDA11P38854 EUG1YDR518W 1554 nt4.81□□□□□ -1.64
TDA11P38854 STR2YJR130C 1920 nt4.81□□□□□ -1.64
TDA11P38854 BLM10YFL007W 6432 nt4.81□□□□□ -1.64
TDA11P38854 FHL1YPR104C 2811 nt4.8□□□□□ -1.64
TDA11P38854 YMD8YML038C 1329 nt4.8□□□□□ -1.64
TDA11P38854 LYS5YGL154C 819 nt4.8□□□□□ -1.64
TDA11P38854 IPI1YHR085W 1005 nt4.8□□□□□ -1.64
TDA11P38854 RPB4YJL140W 666 nt4.8□□□□□ -1.64
TDA11P38854 POM33YLL023C 840 nt4.8□□□□□ -1.64
TDA11P38854 YNL228WYNL228W 777 nt4.8□□□□□ -1.64
TDA11P38854 IMD3YLR432W 1572 nt4.79□□□□□ -1.64
TDA11P38854 APE1YKL103C 1545 nt4.79□□□□□ -1.64
TDA11P38854 HMLALPHA1YCL066W 528 nt4.79□□□□□ -1.64
TDA11P38854 CDC10YCR002C 969 nt4.79□□□□□ -1.64
TDA11P38854 MATALPHA1YCR040W 528 nt4.79□□□□□ -1.64
TDA11P38854 RRP45YDR280W 918 nt4.79□□□□□ -1.64
TDA11P38854 YNL194CYNL194C 906 nt4.79□□□□□ -1.64
TDA11P38854 MED4YOR174W 855 nt4.79□□□□□ -1.64
TDA11P38854 ICE2YIL090W 1476 nt4.79□□□□□ -1.64
TDA11P38854 ESF1YDR365C 1887 nt4.79□□□□□ -1.64
TDA11P38854 FRS1YLR060W 1788 nt4.78□□□□□ -1.64
TDA11P38854 GUS1YGL245W 2127 nt4.78□□□□□ -1.64
TDA11P38854 YPL260WYPL260W 1656 nt4.78□□□□□ -1.64
TDA11P38854 SCM3YDL139C 672 nt4.78□□□□□ -1.64
TDA11P38854 UPS3YDR185C 540 nt4.78□□□□□ -1.64
TDA11P38854 THI5YFL058W 1023 nt4.78□□□□□ -1.64
TDA11P38854 YHR140WYHR140W 720 nt4.78□□□□□ -1.64
TDA11P38854 CTR2YHR175W 570 nt4.78□□□□□ -1.64
TDA11P38854 YMR010WYMR010W 1218 nt4.78□□□□□ -1.64
TDA11P38854 YMR030W-AYMR030W-A 291 nt4.78□□□□□ -1.64
TDA11P38854 THI12YNL332W 1023 nt4.78□□□□□ -1.64
TDA11P38854 ELC1YPL046C 300 nt4.78□□□□□ -1.64
TDA11P38854 PRP28YDR243C 1767 nt4.78□□□□□ -1.64
TDA11P38854 GAS3YMR215W 1575 nt4.78□□□□□ -1.64
TDA11P38854 RSM10YDR041W 612 nt4.77□□□□□ -1.65
TDA11P38854 ATP14YLR295C 375 nt4.77□□□□□ -1.65
TDA11P38854 YDR261C-DYDR261C-D 4815 nt4.77□□□□□ -1.65
TDA11P38854 YGR266WYGR266W 2106 nt4.76□□□□□ -1.65
TDA11P38854 YJR124CYJR124C 1347 nt4.76□□□□□ -1.65
TDA11P38854 YGR153WYGR153W 654 nt4.76□□□□□ -1.65
TDA11P38854 COQ6YGR255C 1440 nt4.76□□□□□ -1.65
TDA11P38854 COS6YGR295C 1146 nt4.76□□□□□ -1.65
TDA11P38854 GPP1YIL053W 753 nt4.76□□□□□ -1.65
TDA11P38854 MID2YLR332W 1131 nt4.76□□□□□ -1.65
TDA11P38854 PTR2YKR093W 1806 nt4.76□□□□□ -1.65
TDA11P38854 SDA1YGR245C 2304 nt4.75□□□□□ -1.65
TDA11P38854 GRC3YLL035W 1899 nt4.75□□□□□ -1.65
TDA11P38854 WTM2YOR229W 1404 nt4.75□□□□□ -1.65
TDA11P38854 MTF1YMR228W 1026 nt4.75□□□□□ -1.65
TDA11P38854 RVB1YDR190C 1392 nt4.75□□□□□ -1.65
TDA11P38854 SEC9YGR009C 1956 nt4.74□□□□□ -1.65
TDA11P38854 APJ1YNL077W 1587 nt4.74□□□□□ -1.65
TDA11P38854 THI21YPL258C 1656 nt4.74□□□□□ -1.65
TDA11P38854 OLE1YGL055W 1533 nt4.74□□□□□ -1.65
TDA11P38854 PCT1YGR202C 1275 nt4.74□□□□□ -1.65
TDA11P38854 ARC40YBR234C 1155 nt4.74□□□□□ -1.65
TDA11P38854 PRD1YCL057W 2139 nt4.73□□□□□ -1.65
TDA11P38854 PRP40YKL012W 1752 nt4.73□□□□□ -1.65
TDA11P38854 YGL036WYGL036W 2730 nt4.73□□□□□ -1.65
TDA11P38854 YDR134CYDR134C 411 nt4.73□□□□□ -1.65
TDA11P38854 RTT103YDR289C 1230 nt4.73□□□□□ -1.65
TDA11P38854 tR(ACG)JtR(ACG)J 73 nt4.73□□□□□ -1.65
TDA11P38854 ADD37YMR184W 597 nt4.73□□□□□ -1.65
TDA11P38854 RER2YBR002C 861 nt4.73□□□□□ -1.65
TDA11P38854 HEM15YOR176W 1182 nt4.73□□□□□ -1.65
TDA11P38854 GIP1YBR045C 1920 nt4.73□□□□□ -1.65
TDA11P38854 BSC5YNR069C 1470 nt4.73□□□□□ -1.65
TDA11P38854 HRK1YOR267C 2280 nt4.72□□□□□ -1.65
TDA11P38854 FDC1YDR539W 1512 nt4.72□□□□□ -1.65
TDA11P38854 YMR102CYMR102C 2505 nt4.72□□□□□ -1.65
TDA11P38854 HST4YDR191W 1113 nt4.72□□□□□ -1.65
TDA11P38854 CBF1YJR060W 1056 nt4.72□□□□□ -1.65
TDA11P38854 FUN19YAL034C 1242 nt4.72□□□□□ -1.65
TDA11P38854 SFT2YBL102W 648 nt4.72□□□□□ -1.65
TDA11P38854 MAK3YPR051W 531 nt4.72□□□□□ -1.65
TDA11P38854 CDS1YBR029C 1374 nt4.72□□□□□ -1.65
TDA11P38854 YEF1YEL041W 1488 nt4.72□□□□□ -1.65
TDA11P38854 MPP10YJR002W 1782 nt4.72□□□□□ -1.65
TDA11P38854 ASA1YPR085C 1332 nt4.72□□□□□ -1.65
TDA11P38854 ISR1YPR106W 1332 nt4.72□□□□□ -1.65
TDA11P38854 KIC1YHR102W 3243 nt4.71□□□□□ -1.66
TDA11P38854 SRV2YNL138W 1581 nt4.71□□□□□ -1.66
TDA11P38854 AI5_BETAQ0075 1065 nt4.71□□□□□ -1.66
TDA11P38854 GSP2YOR185C 663 nt4.71□□□□□ -1.66
TDA11P38854 GRE1YPL223C 507 nt4.71□□□□□ -1.66
TDA11P38854 RIM21YNL294C 1602 nt4.71□□□□□ -1.66
TDA11P38854 TIF4632YGL049C 2745 nt4.71□□□□□ -1.66
TDA11P38854 YIL067CYIL067C 2037 nt4.7□□□□□ -1.66
TDA11P38854 HOF1YMR032W 2010 nt4.7□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms