Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNCAP37840 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNCAP37840 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNCAP37840 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNCAP37840 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNCAP37840 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SNCAP37840 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SNCAP37840 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.72■□□□□ 0.59
SNCAP37840 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNCAP37840 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.72■□□□□ 0.59
SNCAP37840 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNCAP37840 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SNCAP37840 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNCAP37840 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNCAP37840 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNCAP37840 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNCAP37840 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNCAP37840 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNCAP37840 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNCAP37840 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNCAP37840 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNCAP37840 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNCAP37840 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.71■□□□□ 0.59
SNCAP37840 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.71■□□□□ 0.59
SNCAP37840 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
SNCAP37840 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SNCAP37840 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNCAP37840 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.7■□□□□ 0.58
SNCAP37840 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNCAP37840 KRT18P10-201ENST00000388836 1287 ntBASIC18.7■□□□□ 0.58
SNCAP37840 AC093536.1-201ENST00000569153 554 ntBASIC18.7■□□□□ 0.58
SNCAP37840 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNCAP37840 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNCAP37840 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNCAP37840 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNCAP37840 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNCAP37840 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.7■□□□□ 0.58
SNCAP37840 C1orf229-201ENST00000623686 2258 ntBASIC18.7■□□□□ 0.58
SNCAP37840 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNCAP37840 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.69■□□□□ 0.58
SNCAP37840 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNCAP37840 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNCAP37840 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNCAP37840 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNCAP37840 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNCAP37840 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.69■□□□□ 0.58
SNCAP37840 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.69■□□□□ 0.58
SNCAP37840 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNCAP37840 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNCAP37840 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNCAP37840 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
SNCAP37840 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNCAP37840 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNCAP37840 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNCAP37840 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNCAP37840 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNCAP37840 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.68■□□□□ 0.58
SNCAP37840 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNCAP37840 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.68■□□□□ 0.58
SNCAP37840 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.68■□□□□ 0.58
SNCAP37840 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNCAP37840 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.68■□□□□ 0.58
SNCAP37840 AC137767.1-201ENST00000602918 1920 ntBASIC18.68■□□□□ 0.58
SNCAP37840 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.68■□□□□ 0.58
SNCAP37840 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNCAP37840 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SNCAP37840 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNCAP37840 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.67■□□□□ 0.58
SNCAP37840 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SNCAP37840 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNCAP37840 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNCAP37840 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNCAP37840 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.67■□□□□ 0.58
SNCAP37840 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.67■□□□□ 0.58
SNCAP37840 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.67■□□□□ 0.58
SNCAP37840 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.67■□□□□ 0.58
SNCAP37840 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNCAP37840 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNCAP37840 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNCAP37840 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNCAP37840 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNCAP37840 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.66■□□□□ 0.58
SNCAP37840 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.66■□□□□ 0.58
SNCAP37840 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.66■□□□□ 0.58
SNCAP37840 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNCAP37840 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.66■□□□□ 0.58
SNCAP37840 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNCAP37840 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNCAP37840 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.65■□□□□ 0.58
SNCAP37840 AC007029.1-201ENST00000604183 313 ntBASIC18.65■□□□□ 0.58
SNCAP37840 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.65■□□□□ 0.58
SNCAP37840 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNCAP37840 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNCAP37840 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.65■□□□□ 0.58
SNCAP37840 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNCAP37840 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SNCAP37840 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
SNCAP37840 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.64■□□□□ 0.57
SNCAP37840 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SNCAP37840 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms