Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 UNC93B8-201ENST00000511903 705 ntBASIC20.7■□□□□ 0.9
SFTPDP35247 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.7■□□□□ 0.9
SFTPDP35247 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SFTPDP35247 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SFTPDP35247 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SFTPDP35247 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SFTPDP35247 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SFTPDP35247 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SFTPDP35247 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.69■□□□□ 0.9
SFTPDP35247 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SFTPDP35247 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SFTPDP35247 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SFTPDP35247 AC141586.4-201ENST00000624558 1573 ntBASIC20.68■□□□□ 0.9
SFTPDP35247 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SFTPDP35247 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SFTPDP35247 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SFTPDP35247 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SFTPDP35247 AC010997.5-201ENST00000609182 354 ntBASIC20.67■□□□□ 0.9
SFTPDP35247 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SFTPDP35247 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.67■□□□□ 0.9
SFTPDP35247 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SFTPDP35247 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SFTPDP35247 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SFTPDP35247 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SFTPDP35247 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SFTPDP35247 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SFTPDP35247 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SFTPDP35247 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
SFTPDP35247 KRT16P3-201ENST00000439127 1283 ntBASIC20.66■□□□□ 0.9
SFTPDP35247 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SFTPDP35247 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.66■□□□□ 0.9
SFTPDP35247 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SFTPDP35247 AL161729.1-201ENST00000604104 1402 ntBASIC20.66■□□□□ 0.9
SFTPDP35247 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.66■□□□□ 0.9
SFTPDP35247 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.66■□□□□ 0.9
SFTPDP35247 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.66■□□□□ 0.9
SFTPDP35247 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPDP35247 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPDP35247 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPDP35247 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SFTPDP35247 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPDP35247 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.65■□□□□ 0.9
SFTPDP35247 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.65■□□□□ 0.9
SFTPDP35247 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPDP35247 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPDP35247 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.65■□□□□ 0.9
SFTPDP35247 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.65■□□□□ 0.9
SFTPDP35247 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.65■□□□□ 0.9
SFTPDP35247 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.65■□□□□ 0.9
SFTPDP35247 AC004812.2-201ENST00000611079 2094 ntBASIC20.65■□□□□ 0.9
SFTPDP35247 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SFTPDP35247 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SFTPDP35247 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SFTPDP35247 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.64■□□□□ 0.89
SFTPDP35247 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SFTPDP35247 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SFTPDP35247 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SFTPDP35247 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SFTPDP35247 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.64■□□□□ 0.89
SFTPDP35247 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.64■□□□□ 0.89
SFTPDP35247 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SFTPDP35247 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SFTPDP35247 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SFTPDP35247 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.63■□□□□ 0.89
SFTPDP35247 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SFTPDP35247 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.63■□□□□ 0.89
SFTPDP35247 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.63■□□□□ 0.89
SFTPDP35247 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SFTPDP35247 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SFTPDP35247 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTPDP35247 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.62■□□□□ 0.89
SFTPDP35247 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTPDP35247 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTPDP35247 AL356441.2-201ENST00000443009 864 ntBASIC20.62■□□□□ 0.89
SFTPDP35247 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.62■□□□□ 0.89
SFTPDP35247 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.62■□□□□ 0.89
SFTPDP35247 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.62■□□□□ 0.89
SFTPDP35247 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SFTPDP35247 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTPDP35247 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTPDP35247 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SFTPDP35247 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPDP35247 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPDP35247 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.61■□□□□ 0.89
SFTPDP35247 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPDP35247 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPDP35247 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.61■□□□□ 0.89
SFTPDP35247 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.61■□□□□ 0.89
SFTPDP35247 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SFTPDP35247 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPDP35247 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SFTPDP35247 ABCB10P4-201ENST00000566803 2184 ntBASIC20.61■□□□□ 0.89
SFTPDP35247 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SFTPDP35247 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SFTPDP35247 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SFTPDP35247 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SFTPDP35247 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SFTPDP35247 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.6■□□□□ 0.89
SFTPDP35247 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.6■□□□□ 0.89
SFTPDP35247 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms