Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LINC00543-201ENST00000567234 1845 ntBASIC20.9■□□□□ 0.94
SHC1P29353 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC1P29353 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHC1P29353 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC1P29353 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.9■□□□□ 0.94
SHC1P29353 AC137630.3-201ENST00000607245 391 ntBASIC20.9■□□□□ 0.94
SHC1P29353 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHC1P29353 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.89■□□□□ 0.93
SHC1P29353 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC1P29353 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHC1P29353 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SHC1P29353 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.89■□□□□ 0.93
SHC1P29353 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.89■□□□□ 0.93
SHC1P29353 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SHC1P29353 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.89■□□□□ 0.93
SHC1P29353 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SHC1P29353 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHC1P29353 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHC1P29353 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.88■□□□□ 0.93
SHC1P29353 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHC1P29353 AC239859.2-201ENST00000444165 318 ntBASIC20.88■□□□□ 0.93
SHC1P29353 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.88■□□□□ 0.93
SHC1P29353 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.88■□□□□ 0.93
SHC1P29353 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHC1P29353 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC1P29353 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC1P29353 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.87■□□□□ 0.93
SHC1P29353 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC1P29353 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.87■□□□□ 0.93
SHC1P29353 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC1P29353 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHC1P29353 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.87■□□□□ 0.93
SHC1P29353 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.87■□□□□ 0.93
SHC1P29353 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.87■□□□□ 0.93
SHC1P29353 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC1P29353 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHC1P29353 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SHC1P29353 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHC1P29353 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.86■□□□□ 0.93
SHC1P29353 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.86■□□□□ 0.93
SHC1P29353 BX664725.1-201ENST00000438252 379 ntBASIC20.86■□□□□ 0.93
SHC1P29353 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.86■□□□□ 0.93
SHC1P29353 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHC1P29353 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SHC1P29353 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SHC1P29353 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SHC1P29353 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC1P29353 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC1P29353 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC1P29353 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC1P29353 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC1P29353 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC1P29353 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SHC1P29353 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.85■□□□□ 0.93
SHC1P29353 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.85■□□□□ 0.93
SHC1P29353 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHC1P29353 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SHC1P29353 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SHC1P29353 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC1P29353 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHC1P29353 AC021242.3-201ENST00000607598 1377 ntBASIC20.85■□□□□ 0.93
SHC1P29353 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHC1P29353 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.84■□□□□ 0.93
SHC1P29353 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHC1P29353 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHC1P29353 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.84■□□□□ 0.93
SHC1P29353 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
SHC1P29353 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.84■□□□□ 0.93
SHC1P29353 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.84■□□□□ 0.93
SHC1P29353 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHC1P29353 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
SHC1P29353 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHC1P29353 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHC1P29353 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHC1P29353 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SHC1P29353 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.83■□□□□ 0.93
SHC1P29353 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SHC1P29353 Z92544.1-202ENST00000571933 1220 ntBASIC20.83■□□□□ 0.93
SHC1P29353 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHC1P29353 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SHC1P29353 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHC1P29353 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHC1P29353 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.83■□□□□ 0.92
SHC1P29353 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC1P29353 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.82■□□□□ 0.92
SHC1P29353 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.82■□□□□ 0.92
SHC1P29353 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SHC1P29353 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC1P29353 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.82■□□□□ 0.92
SHC1P29353 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.82■□□□□ 0.92
SHC1P29353 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.82■□□□□ 0.92
SHC1P29353 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC1P29353 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.82■□□□□ 0.92
SHC1P29353 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHC1P29353 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SHC1P29353 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SHC1P29353 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHC1P29353 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHC1P29353 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.81■□□□□ 0.92
SHC1P29353 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms