Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFRSF1BP20333 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFRSF1BP20333 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1BP20333 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 MIR6765-201ENST00000614092 87 ntBASIC21.22■□□□□ 0.99
TNFRSF1BP20333 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TNFRSF1BP20333 AC079834.2-201ENST00000609776 1949 ntBASIC21.21■□□□□ 0.99
TNFRSF1BP20333 AL592295.1-201ENST00000400984 884 ntBASIC21.21■□□□□ 0.99
TNFRSF1BP20333 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFRSF1BP20333 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF1BP20333 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TNFRSF1BP20333 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF1BP20333 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF1BP20333 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.2■□□□□ 0.99
TNFRSF1BP20333 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF1BP20333 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF1BP20333 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF1BP20333 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF1BP20333 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
TNFRSF1BP20333 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TNFRSF1BP20333 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF1BP20333 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
TNFRSF1BP20333 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.19■□□□□ 0.98
TNFRSF1BP20333 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF1BP20333 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF1BP20333 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.19■□□□□ 0.98
TNFRSF1BP20333 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFRSF1BP20333 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 U85056.1-201ENST00000616429 682 ntBASIC21.18■□□□□ 0.98
TNFRSF1BP20333 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF1BP20333 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1BP20333 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1BP20333 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1BP20333 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1BP20333 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TNFRSF1BP20333 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
TNFRSF1BP20333 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1BP20333 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1BP20333 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1BP20333 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF1BP20333 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF1BP20333 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF1BP20333 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF1BP20333 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF1BP20333 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.16■□□□□ 0.98
TNFRSF1BP20333 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.16■□□□□ 0.98
TNFRSF1BP20333 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TNFRSF1BP20333 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 RARRES2P2-201ENST00000394842 485 ntBASIC21.15■□□□□ 0.98
TNFRSF1BP20333 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.15■□□□□ 0.98
TNFRSF1BP20333 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms