Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCL3P19876 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL3P19876 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL3P19876 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.24■□□□□ 0.67
CXCL3P19876 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL3P19876 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CXCL3P19876 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.24■□□□□ 0.67
CXCL3P19876 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.24■□□□□ 0.67
CXCL3P19876 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL3P19876 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL3P19876 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL3P19876 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL3P19876 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCL3P19876 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CXCL3P19876 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CXCL3P19876 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL3P19876 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL3P19876 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL3P19876 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL3P19876 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.23■□□□□ 0.67
CXCL3P19876 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL3P19876 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCL3P19876 AC242852.2-201ENST00000615738 1807 ntBASIC19.23■□□□□ 0.67
CXCL3P19876 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CXCL3P19876 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CXCL3P19876 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL3P19876 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CXCL3P19876 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CXCL3P19876 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.22■□□□□ 0.67
CXCL3P19876 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.22■□□□□ 0.67
CXCL3P19876 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CXCL3P19876 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CXCL3P19876 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL3P19876 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL3P19876 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.21■□□□□ 0.67
CXCL3P19876 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL3P19876 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CXCL3P19876 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CXCL3P19876 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CXCL3P19876 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL3P19876 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL3P19876 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL3P19876 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CXCL3P19876 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL3P19876 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL3P19876 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CXCL3P19876 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL3P19876 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.2■□□□□ 0.66
CXCL3P19876 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.2■□□□□ 0.66
CXCL3P19876 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CXCL3P19876 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.2■□□□□ 0.66
CXCL3P19876 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CXCL3P19876 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CXCL3P19876 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.19■□□□□ 0.66
CXCL3P19876 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCL3P19876 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CXCL3P19876 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCL3P19876 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CXCL3P19876 DUX4L28-201ENST00000623687 678 ntBASIC19.19■□□□□ 0.66
CXCL3P19876 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.19■□□□□ 0.66
CXCL3P19876 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCL3P19876 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXCL3P19876 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXCL3P19876 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.18■□□□□ 0.66
CXCL3P19876 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.18■□□□□ 0.66
CXCL3P19876 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CXCL3P19876 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXCL3P19876 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.18■□□□□ 0.66
CXCL3P19876 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.18■□□□□ 0.66
CXCL3P19876 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.18■□□□□ 0.66
CXCL3P19876 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CXCL3P19876 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCL3P19876 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCL3P19876 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXCL3P19876 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCL3P19876 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCL3P19876 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCL3P19876 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CXCL3P19876 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.17■□□□□ 0.66
CXCL3P19876 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CXCL3P19876 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCL3P19876 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.16■□□□□ 0.66
CXCL3P19876 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.16■□□□□ 0.66
CXCL3P19876 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXCL3P19876 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXCL3P19876 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXCL3P19876 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXCL3P19876 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CXCL3P19876 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.16■□□□□ 0.66
CXCL3P19876 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXCL3P19876 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXCL3P19876 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CXCL3P19876 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.16■□□□□ 0.66
CXCL3P19876 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CXCL3P19876 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CXCL3P19876 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXCL3P19876 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CXCL3P19876 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CXCL3P19876 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CXCL3P19876 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms