Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 DUX4L6-201ENST00000626483 1275 ntBASIC28.53■■■□□ 2.16
COL11A2P13942 DUX4L1-201ENST00000627662 1275 ntBASIC28.53■■■□□ 2.16
COL11A2P13942 DUX4L8-201ENST00000629013 1275 ntBASIC28.53■■■□□ 2.16
COL11A2P13942 DUX4L3-201ENST00000630187 1275 ntBASIC28.53■■■□□ 2.16
COL11A2P13942 DUX4L7-201ENST00000630678 1275 ntBASIC28.53■■■□□ 2.16
COL11A2P13942 DUX4L5-201ENST00000630834 1275 ntBASIC28.53■■■□□ 2.16
COL11A2P13942 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
COL11A2P13942 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.53■■■□□ 2.16
COL11A2P13942 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL11A2P13942 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
COL11A2P13942 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
COL11A2P13942 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.52■■■□□ 2.16
COL11A2P13942 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
COL11A2P13942 MIR6089-201ENST00000616698 64 ntBASIC28.52■■■□□ 2.16
COL11A2P13942 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
COL11A2P13942 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.52■■■□□ 2.16
COL11A2P13942 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.52■■■□□ 2.16
COL11A2P13942 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
COL11A2P13942 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.52■■■□□ 2.16
COL11A2P13942 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
COL11A2P13942 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.51■■■□□ 2.15
COL11A2P13942 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.51■■■□□ 2.15
COL11A2P13942 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.51■■■□□ 2.15
COL11A2P13942 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
COL11A2P13942 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.51■■■□□ 2.15
COL11A2P13942 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL11A2P13942 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.5■■■□□ 2.15
COL11A2P13942 AC027612.3-201ENST00000413684 1047 ntBASIC28.5■■■□□ 2.15
COL11A2P13942 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.5■■■□□ 2.15
COL11A2P13942 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
COL11A2P13942 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.49■■■□□ 2.15
COL11A2P13942 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL11A2P13942 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
COL11A2P13942 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.49■■■□□ 2.15
COL11A2P13942 BX842568.3-201ENST00000418104 571 ntBASIC28.49■■■□□ 2.15
COL11A2P13942 SLC47A1P1-202ENST00000449666 945 ntBASIC28.49■■■□□ 2.15
COL11A2P13942 AC233992.3-201ENST00000607491 485 ntBASIC28.49■■■□□ 2.15
COL11A2P13942 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.49■■■□□ 2.15
COL11A2P13942 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL11A2P13942 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
COL11A2P13942 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.49■■■□□ 2.15
COL11A2P13942 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
COL11A2P13942 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.49■■■□□ 2.15
COL11A2P13942 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.49■■■□□ 2.15
COL11A2P13942 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.49■■■□□ 2.15
COL11A2P13942 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.48■■■□□ 2.15
COL11A2P13942 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL11A2P13942 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
COL11A2P13942 AC241377.3-202ENST00000626088 1088 ntBASIC28.48■■■□□ 2.15
COL11A2P13942 AC241585.3-202ENST00000628937 1088 ntBASIC28.48■■■□□ 2.15
COL11A2P13942 AC245100.8-202ENST00000629247 1058 ntBASIC28.48■■■□□ 2.15
COL11A2P13942 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.48■■■□□ 2.15
COL11A2P13942 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL11A2P13942 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
COL11A2P13942 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL11A2P13942 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.47■■■□□ 2.15
COL11A2P13942 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.47■■■□□ 2.15
COL11A2P13942 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.47■■■□□ 2.15
COL11A2P13942 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL11A2P13942 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.46■■■□□ 2.15
COL11A2P13942 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL11A2P13942 AC009086.3-201ENST00000623486 1008 ntBASIC28.46■■■□□ 2.15
COL11A2P13942 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.46■■■□□ 2.15
COL11A2P13942 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.46■■■□□ 2.15
COL11A2P13942 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL11A2P13942 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL11A2P13942 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL11A2P13942 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.46■■■□□ 2.15
COL11A2P13942 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL11A2P13942 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL11A2P13942 YBX1P1-201ENST00000445822 960 ntBASIC28.46■■■□□ 2.15
COL11A2P13942 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.46■■■□□ 2.15
COL11A2P13942 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.45■■■□□ 2.15
COL11A2P13942 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL11A2P13942 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL11A2P13942 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL11A2P13942 AC022517.1-201ENST00000592429 346 ntBASIC28.44■■■□□ 2.14
COL11A2P13942 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.44■■■□□ 2.14
COL11A2P13942 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
COL11A2P13942 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL11A2P13942 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL11A2P13942 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
COL11A2P13942 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
COL11A2P13942 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.43■■■□□ 2.14
COL11A2P13942 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.43■■■□□ 2.14
COL11A2P13942 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL11A2P13942 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.43■■■□□ 2.14
COL11A2P13942 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.43■■■□□ 2.14
COL11A2P13942 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
COL11A2P13942 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL11A2P13942 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL11A2P13942 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.43■■■□□ 2.14
COL11A2P13942 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.43■■■□□ 2.14
COL11A2P13942 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.42■■■□□ 2.14
COL11A2P13942 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
COL11A2P13942 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.42■■■□□ 2.14
COL11A2P13942 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
COL11A2P13942 MIR3181-201ENST00000578512 73 ntBASIC28.42■■■□□ 2.14
COL11A2P13942 AL137784.2-201ENST00000607332 1000 ntBASIC28.42■■■□□ 2.14
COL11A2P13942 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms