Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL11A1P12107 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL11A1P12107 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.4■■□□□ 1.82
COL11A1P12107 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.4■■□□□ 1.82
COL11A1P12107 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL11A1P12107 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
COL11A1P12107 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
COL11A1P12107 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL11A1P12107 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL11A1P12107 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.39■■□□□ 1.82
COL11A1P12107 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
COL11A1P12107 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL11A1P12107 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
COL11A1P12107 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
COL11A1P12107 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.39■■□□□ 1.81
COL11A1P12107 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A1P12107 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A1P12107 MIR939-201ENST00000401314 82 ntBASIC26.38■■□□□ 1.81
COL11A1P12107 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
COL11A1P12107 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.38■■□□□ 1.81
COL11A1P12107 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.38■■□□□ 1.81
COL11A1P12107 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A1P12107 AL022069.1-201ENST00000568025 1636 ntBASIC26.38■■□□□ 1.81
COL11A1P12107 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.38■■□□□ 1.81
COL11A1P12107 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL11A1P12107 SERBP1P1-201ENST00000396021 1160 ntBASIC26.37■■□□□ 1.81
COL11A1P12107 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A1P12107 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A1P12107 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
COL11A1P12107 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A1P12107 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A1P12107 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.37■■□□□ 1.81
COL11A1P12107 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A1P12107 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL11A1P12107 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.37■■□□□ 1.81
COL11A1P12107 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL11A1P12107 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.36■■□□□ 1.81
COL11A1P12107 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL11A1P12107 AC099791.2-201ENST00000605725 427 ntBASIC26.36■■□□□ 1.81
COL11A1P12107 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.36■■□□□ 1.81
COL11A1P12107 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL11A1P12107 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A1P12107 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A1P12107 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL11A1P12107 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.35■■□□□ 1.81
COL11A1P12107 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL11A1P12107 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL11A1P12107 AC009102.2-201ENST00000606772 1639 ntBASIC26.34■■□□□ 1.81
COL11A1P12107 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.34■■□□□ 1.81
COL11A1P12107 AC006455.2-201ENST00000429931 906 ntBASIC26.34■■□□□ 1.81
COL11A1P12107 AC011298.3-201ENST00000615796 283 ntBASIC26.33■■□□□ 1.81
COL11A1P12107 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.33■■□□□ 1.81
COL11A1P12107 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.33■■□□□ 1.81
COL11A1P12107 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
COL11A1P12107 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.33■■□□□ 1.81
COL11A1P12107 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL11A1P12107 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.33■■□□□ 1.8
COL11A1P12107 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A1P12107 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A1P12107 MIR4767-201ENST00000582827 78 ntBASIC26.32■■□□□ 1.8
COL11A1P12107 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
COL11A1P12107 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A1P12107 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.32■■□□□ 1.8
COL11A1P12107 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A1P12107 AL136967.2-201ENST00000623968 743 ntBASIC26.32■■□□□ 1.8
COL11A1P12107 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.32■■□□□ 1.8
COL11A1P12107 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.32■■□□□ 1.8
COL11A1P12107 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL11A1P12107 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL11A1P12107 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL11A1P12107 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL11A1P12107 SYT6-210ENST00000641643 1587 ntBASIC26.31■■□□□ 1.8
COL11A1P12107 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL11A1P12107 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL11A1P12107 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL11A1P12107 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.3■■□□□ 1.8
COL11A1P12107 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL11A1P12107 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL11A1P12107 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL11A1P12107 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
COL11A1P12107 AL355001.2-201ENST00000620617 1191 ntBASIC26.3■■□□□ 1.8
COL11A1P12107 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL11A1P12107 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL11A1P12107 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.29■■□□□ 1.8
COL11A1P12107 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
COL11A1P12107 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL11A1P12107 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
COL11A1P12107 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A1P12107 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A1P12107 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A1P12107 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL11A1P12107 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.28■■□□□ 1.8
COL11A1P12107 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL11A1P12107 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL11A1P12107 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL11A1P12107 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.27■■□□□ 1.8
COL11A1P12107 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
COL11A1P12107 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
COL11A1P12107 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL11A1P12107 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 401.5 ms