Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.07■□□□□ 0.48
PF4V1P10720 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.07■□□□□ 0.48
PF4V1P10720 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.07■□□□□ 0.48
PF4V1P10720 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PF4V1P10720 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PF4V1P10720 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.07■□□□□ 0.48
PF4V1P10720 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PF4V1P10720 HLA-L-211ENST00000482052 1765 ntBASIC18.07■□□□□ 0.48
PF4V1P10720 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PF4V1P10720 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.06■□□□□ 0.48
PF4V1P10720 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PF4V1P10720 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.06■□□□□ 0.48
PF4V1P10720 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PF4V1P10720 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PF4V1P10720 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PF4V1P10720 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.06■□□□□ 0.48
PF4V1P10720 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PF4V1P10720 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PF4V1P10720 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PF4V1P10720 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.05■□□□□ 0.48
PF4V1P10720 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PF4V1P10720 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PF4V1P10720 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.05■□□□□ 0.48
PF4V1P10720 MIR3621-201ENST00000580529 85 ntBASIC18.05■□□□□ 0.48
PF4V1P10720 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PF4V1P10720 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PF4V1P10720 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PF4V1P10720 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PF4V1P10720 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.05■□□□□ 0.48
PF4V1P10720 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PF4V1P10720 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PF4V1P10720 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.04■□□□□ 0.48
PF4V1P10720 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.04■□□□□ 0.48
PF4V1P10720 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.04■□□□□ 0.48
PF4V1P10720 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PF4V1P10720 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PF4V1P10720 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PF4V1P10720 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PF4V1P10720 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.03■□□□□ 0.48
PF4V1P10720 AL139246.5-201ENST00000606645 996 ntBASIC18.03■□□□□ 0.48
PF4V1P10720 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PF4V1P10720 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PF4V1P10720 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.03■□□□□ 0.48
PF4V1P10720 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.03■□□□□ 0.48
PF4V1P10720 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.02■□□□□ 0.48
PF4V1P10720 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PF4V1P10720 AL022069.1-201ENST00000568025 1636 ntBASIC18.02■□□□□ 0.48
PF4V1P10720 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PF4V1P10720 AC135731.1-201ENST00000569415 2548 ntBASIC18.02■□□□□ 0.48
PF4V1P10720 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.02■□□□□ 0.48
PF4V1P10720 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.02■□□□□ 0.48
PF4V1P10720 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.02■□□□□ 0.48
PF4V1P10720 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.02■□□□□ 0.48
PF4V1P10720 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.02■□□□□ 0.47
PF4V1P10720 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PF4V1P10720 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PF4V1P10720 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PF4V1P10720 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PF4V1P10720 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.01■□□□□ 0.47
PF4V1P10720 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PF4V1P10720 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PF4V1P10720 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PF4V1P10720 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PF4V1P10720 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PF4V1P10720 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PF4V1P10720 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PF4V1P10720 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.01■□□□□ 0.47
PF4V1P10720 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PF4V1P10720 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PF4V1P10720 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PF4V1P10720 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18■□□□□ 0.47
PF4V1P10720 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18■□□□□ 0.47
PF4V1P10720 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18■□□□□ 0.47
PF4V1P10720 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PF4V1P10720 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PF4V1P10720 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18■□□□□ 0.47
PF4V1P10720 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
PF4V1P10720 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18■□□□□ 0.47
PF4V1P10720 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PF4V1P10720 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PF4V1P10720 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18■□□□□ 0.47
PF4V1P10720 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18■□□□□ 0.47
PF4V1P10720 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PF4V1P10720 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18■□□□□ 0.47
PF4V1P10720 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18■□□□□ 0.47
PF4V1P10720 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PF4V1P10720 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PF4V1P10720 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PF4V1P10720 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PF4V1P10720 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.99■□□□□ 0.47
PF4V1P10720 MIR935-201ENST00000401179 91 ntBASIC17.99■□□□□ 0.47
PF4V1P10720 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.99■□□□□ 0.47
PF4V1P10720 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.99■□□□□ 0.47
PF4V1P10720 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PF4V1P10720 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PF4V1P10720 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.99■□□□□ 0.47
PF4V1P10720 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PF4V1P10720 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PF4V1P10720 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.98■□□□□ 0.47
PF4V1P10720 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms