Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YBL044WYBL044W 369 nt5.12□□□□□ -1.59
TY2A-LR1P0C2J4 RMI1YPL024W 726 nt5.12□□□□□ -1.59
TY2A-LR1P0C2J4 CBC2YPL178W 627 nt5.12□□□□□ -1.59
TY2A-LR1P0C2J4 PIF1YML061C 2580 nt5.12□□□□□ -1.59
TY2A-LR1P0C2J4 MLF3YNL074C 1359 nt5.12□□□□□ -1.59
TY2A-LR1P0C2J4 TNA1YGR260W 1605 nt5.12□□□□□ -1.59
TY2A-LR1P0C2J4 HRP1YOL123W 1605 nt5.12□□□□□ -1.59
TY2A-LR1P0C2J4 NSE3YDR288W 912 nt5.11□□□□□ -1.59
TY2A-LR1P0C2J4 RHO4YKR055W 876 nt5.11□□□□□ -1.59
TY2A-LR1P0C2J4 YLR326WYLR326W 723 nt5.11□□□□□ -1.59
TY2A-LR1P0C2J4 YMR075C-AYMR075C-A 366 nt5.11□□□□□ -1.59
TY2A-LR1P0C2J4 RRP40YOL142W 723 nt5.11□□□□□ -1.59
TY2A-LR1P0C2J4 YGL036WYGL036W 2730 nt5.11□□□□□ -1.59
TY2A-LR1P0C2J4 YDL109CYDL109C 1944 nt5.11□□□□□ -1.59
TY2A-LR1P0C2J4 HSP104YLL026W 2727 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 GRX6YDL010W 696 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 UBC1YDR177W 648 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 GLO2YDR272W 825 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 PCT1YGR202C 1275 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 HXT4YHR092C 1731 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 MND2YIR025W 1107 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 SMF3YLR034C 1422 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 TOS4YLR183C 1470 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 BLS1YLR408C 369 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 KTR3YBR205W 1215 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 SRB6YBR253W 366 nt5.1□□□□□ -1.59
TY2A-LR1P0C2J4 SIR1YKR101W 1965 nt5.09□□□□□ -1.59
TY2A-LR1P0C2J4 CUS1YMR240C 1311 nt5.09□□□□□ -1.59
TY2A-LR1P0C2J4 CLP1YOR250C 1338 nt5.09□□□□□ -1.59
TY2A-LR1P0C2J4 snR78snR78 87 nt5.09□□□□□ -1.59
TY2A-LR1P0C2J4 HSP31YDR533C 714 nt5.09□□□□□ -1.59
TY2A-LR1P0C2J4 YLR374CYLR374C 390 nt5.09□□□□□ -1.59
TY2A-LR1P0C2J4 FPK1YNR047W 2682 nt5.09□□□□□ -1.6
TY2A-LR1P0C2J4 HST1YOL068C 1512 nt5.08□□□□□ -1.6
TY2A-LR1P0C2J4 VTH1YIL173W 4650 nt5.08□□□□□ -1.6
TY2A-LR1P0C2J4 VTH2YJL222W 4650 nt5.08□□□□□ -1.6
TY2A-LR1P0C2J4 ARP2YDL029W 1176 nt5.08□□□□□ -1.6
TY2A-LR1P0C2J4 SYN8YAL014C 768 nt5.08□□□□□ -1.6
TY2A-LR1P0C2J4 PEX22YAL055W 543 nt5.08□□□□□ -1.6
TY2A-LR1P0C2J4 YML101C-AYML101C-A 318 nt5.08□□□□□ -1.6
TY2A-LR1P0C2J4 SFB3YHR098C 2790 nt5.08□□□□□ -1.6
TY2A-LR1P0C2J4 PRR2YDL214C 2100 nt5.08□□□□□ -1.6
TY2A-LR1P0C2J4 TMN2YDR107C 2019 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 PCL8YPL219W 1479 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 HFI1YPL254W 1467 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 HPF1YOL155C 2904 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 VPS70YJR126C 2436 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 YDR282CYDR282C 1245 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 EPS1YIL005W 2106 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 YIL152WYIL152W 708 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 YKL223WYKL223W 333 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 MRPL13YKR006C 795 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 YLR194CYLR194C 765 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 ROX3YBL093C 663 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 GPM3YOL056W 912 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 YOR008W-BYOR008W-B 102 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 PRM2YIL037C 1971 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 YIR007WYIR007W 2295 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 PMT5YDL093W 2232 nt5.07□□□□□ -1.6
TY2A-LR1P0C2J4 TIM54YJL054W 1437 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 FOL1YNL256W 2475 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 ULA1YPL003W 1389 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 ZRC1YMR243C 1329 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 YKL151CYKL151C 1014 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 YLR296WYLR296W 327 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 POR1YNL055C 852 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 RPS19BYNL302C 435 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 BDP1YNL039W 1785 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 PHO8YDR481C 1701 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 AIM10YER087W 1731 nt5.06□□□□□ -1.6
TY2A-LR1P0C2J4 NQM1YGR043C 1002 nt5.05□□□□□ -1.6
TY2A-LR1P0C2J4 CBF1YJR060W 1056 nt5.05□□□□□ -1.6
TY2A-LR1P0C2J4 YLR118CYLR118C 684 nt5.05□□□□□ -1.6
TY2A-LR1P0C2J4 YLR283WYLR283W 945 nt5.05□□□□□ -1.6
TY2A-LR1P0C2J4 YBL077WYBL077W 432 nt5.05□□□□□ -1.6
TY2A-LR1P0C2J4 YNG1YOR064C 660 nt5.05□□□□□ -1.6
TY2A-LR1P0C2J4 ENV9YOR246C 993 nt5.05□□□□□ -1.6
TY2A-LR1P0C2J4 CPA1YOR303W 1236 nt5.05□□□□□ -1.6
TY2A-LR1P0C2J4 SEO1YAL067C 1782 nt5.05□□□□□ -1.6
TY2A-LR1P0C2J4 YDR444WYDR444W 2064 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 SOG2YOR353C 2376 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 VCX1YDL128W 1236 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 PHO92YDR374C 921 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 PRO3YER023W 861 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 GLE2YER107C 1098 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 SLO1YER180C-A 258 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 CAB4YGR277C 918 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 MHO1YJR008W 1017 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 ROT1YMR200W 771 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 NAT3YPR131C 588 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 QDR1YIL120W 1692 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 CNA1YLR433C 1662 nt5.04□□□□□ -1.6
TY2A-LR1P0C2J4 RIM101YHL027W 1878 nt5.03□□□□□ -1.6
TY2A-LR1P0C2J4 CWC21YDR482C 408 nt5.03□□□□□ -1.6
TY2A-LR1P0C2J4 IRC6YFR043C 714 nt5.03□□□□□ -1.6
TY2A-LR1P0C2J4 YKR041WYKR041W 753 nt5.03□□□□□ -1.6
TY2A-LR1P0C2J4 GSP2YOR185C 663 nt5.03□□□□□ -1.6
TY2A-LR1P0C2J4 MET16YPR167C 786 nt5.03□□□□□ -1.6
TY2A-LR1P0C2J4 YBR196C-BYBR196C-B 105 nt5.03□□□□□ -1.6
TY2A-LR1P0C2J4 SSZ1YHR064C 1617 nt5.03□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 11 ms