Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.79■■□□□ 1.4
CD48P09326 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.79■■□□□ 1.4
CD48P09326 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CD48P09326 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.79■■□□□ 1.4
CD48P09326 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.78■■□□□ 1.4
CD48P09326 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CD48P09326 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.78■■□□□ 1.4
CD48P09326 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.78■■□□□ 1.4
CD48P09326 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD48P09326 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CD48P09326 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD48P09326 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CD48P09326 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CD48P09326 AL161729.1-201ENST00000604104 1402 ntBASIC23.77■■□□□ 1.4
CD48P09326 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD48P09326 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CD48P09326 YBX1P4-201ENST00000392794 808 ntBASIC23.77■■□□□ 1.4
CD48P09326 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.77■■□□□ 1.4
CD48P09326 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.77■■□□□ 1.4
CD48P09326 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CD48P09326 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD48P09326 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CD48P09326 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD48P09326 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD48P09326 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD48P09326 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD48P09326 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD48P09326 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CD48P09326 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.76■■□□□ 1.39
CD48P09326 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CD48P09326 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.75■■□□□ 1.39
CD48P09326 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD48P09326 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.75■■□□□ 1.39
CD48P09326 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD48P09326 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CD48P09326 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CD48P09326 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CD48P09326 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.74■■□□□ 1.39
CD48P09326 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CD48P09326 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.74■■□□□ 1.39
CD48P09326 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CD48P09326 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CD48P09326 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CD48P09326 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.73■■□□□ 1.39
CD48P09326 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CD48P09326 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CD48P09326 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CD48P09326 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CD48P09326 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.73■■□□□ 1.39
CD48P09326 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CD48P09326 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.73■■□□□ 1.39
CD48P09326 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CD48P09326 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.72■■□□□ 1.39
CD48P09326 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CD48P09326 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.72■■□□□ 1.39
CD48P09326 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CD48P09326 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CD48P09326 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CD48P09326 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CD48P09326 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CD48P09326 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CD48P09326 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CD48P09326 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.71■■□□□ 1.39
CD48P09326 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.71■■□□□ 1.39
CD48P09326 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.71■■□□□ 1.39
CD48P09326 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CD48P09326 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CD48P09326 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CD48P09326 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CD48P09326 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CD48P09326 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CD48P09326 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CD48P09326 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CD48P09326 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CD48P09326 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CD48P09326 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.7■■□□□ 1.38
CD48P09326 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.7■■□□□ 1.38
CD48P09326 AL031848.2-201ENST00000607670 837 ntBASIC23.7■■□□□ 1.38
CD48P09326 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CD48P09326 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
CD48P09326 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CD48P09326 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CD48P09326 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CD48P09326 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.69■■□□□ 1.38
CD48P09326 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CD48P09326 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.69■■□□□ 1.38
CD48P09326 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CD48P09326 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CD48P09326 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.68■■□□□ 1.38
CD48P09326 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.68■■□□□ 1.38
CD48P09326 ALDH1A3-203ENST00000557963 1670 ntBASIC23.68■■□□□ 1.38
CD48P09326 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CD48P09326 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.68■■□□□ 1.38
CD48P09326 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CD48P09326 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.68■■□□□ 1.38
CD48P09326 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CD48P09326 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.68■■□□□ 1.38
CD48P09326 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.68■■□□□ 1.38
CD48P09326 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CD48P09326 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms