Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOD3P08294 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOD3P08294 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOD3P08294 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
SOD3P08294 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOD3P08294 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.7■□□□□ 0.74
SOD3P08294 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOD3P08294 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.7■□□□□ 0.74
SOD3P08294 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SOD3P08294 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOD3P08294 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SOD3P08294 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOD3P08294 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.7■□□□□ 0.74
SOD3P08294 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOD3P08294 AC020928.2-201ENST00000588717 2197 ntBASIC19.69■□□□□ 0.74
SOD3P08294 AL136162.1-201ENST00000607711 1078 ntBASIC19.69■□□□□ 0.74
SOD3P08294 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOD3P08294 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.69■□□□□ 0.74
SOD3P08294 AC005703.6-201ENST00000623265 1329 ntBASIC19.69■□□□□ 0.74
SOD3P08294 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOD3P08294 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOD3P08294 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SOD3P08294 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SOD3P08294 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOD3P08294 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOD3P08294 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOD3P08294 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOD3P08294 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.68■□□□□ 0.74
SOD3P08294 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SOD3P08294 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SOD3P08294 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SOD3P08294 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.68■□□□□ 0.74
SOD3P08294 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SOD3P08294 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOD3P08294 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOD3P08294 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOD3P08294 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.67■□□□□ 0.74
SOD3P08294 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOD3P08294 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.67■□□□□ 0.74
SOD3P08294 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SOD3P08294 AC142381.2-201ENST00000566120 298 ntBASIC19.67■□□□□ 0.74
SOD3P08294 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.67■□□□□ 0.74
SOD3P08294 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOD3P08294 AC135279.3-201ENST00000610945 1311 ntBASIC19.67■□□□□ 0.74
SOD3P08294 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOD3P08294 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SOD3P08294 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOD3P08294 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOD3P08294 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.66■□□□□ 0.74
SOD3P08294 AC131274.2-201ENST00000580697 1507 ntBASIC19.66■□□□□ 0.74
SOD3P08294 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOD3P08294 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SOD3P08294 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOD3P08294 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.66■□□□□ 0.74
SOD3P08294 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.66■□□□□ 0.74
SOD3P08294 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.66■□□□□ 0.74
SOD3P08294 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOD3P08294 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.66■□□□□ 0.74
SOD3P08294 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOD3P08294 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.65■□□□□ 0.74
SOD3P08294 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOD3P08294 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SOD3P08294 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SOD3P08294 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.65■□□□□ 0.74
SOD3P08294 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOD3P08294 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOD3P08294 AL031432.3-201ENST00000607698 485 ntBASIC19.65■□□□□ 0.74
SOD3P08294 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SOD3P08294 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.65■□□□□ 0.74
SOD3P08294 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.65■□□□□ 0.74
SOD3P08294 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOD3P08294 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOD3P08294 DUSP8P4-201ENST00000399538 1761 ntBASIC19.65■□□□□ 0.74
SOD3P08294 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOD3P08294 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.64■□□□□ 0.73
SOD3P08294 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.64■□□□□ 0.73
SOD3P08294 AC024257.2-201ENST00000549699 147 ntBASIC19.64■□□□□ 0.73
SOD3P08294 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.64■□□□□ 0.73
SOD3P08294 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOD3P08294 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOD3P08294 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.64■□□□□ 0.73
SOD3P08294 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOD3P08294 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOD3P08294 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SOD3P08294 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOD3P08294 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOD3P08294 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOD3P08294 ZNRF2P3-201ENST00000424200 374 ntBASIC19.63■□□□□ 0.73
SOD3P08294 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOD3P08294 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOD3P08294 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.63■□□□□ 0.73
SOD3P08294 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOD3P08294 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.62■□□□□ 0.73
SOD3P08294 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOD3P08294 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.62■□□□□ 0.73
SOD3P08294 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOD3P08294 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.62■□□□□ 0.73
SOD3P08294 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.62■□□□□ 0.73
SOD3P08294 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.62■□□□□ 0.73
SOD3P08294 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms