Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
MMP1P03956 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.38■■□□□ 1.81
MMP1P03956 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
MMP1P03956 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
MMP1P03956 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.37■■□□□ 1.81
MMP1P03956 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
MMP1P03956 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.37■■□□□ 1.81
MMP1P03956 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.37■■□□□ 1.81
MMP1P03956 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
MMP1P03956 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.37■■□□□ 1.81
MMP1P03956 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
MMP1P03956 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
MMP1P03956 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.37■■□□□ 1.81
MMP1P03956 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.37■■□□□ 1.81
MMP1P03956 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
MMP1P03956 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
MMP1P03956 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.37■■□□□ 1.81
MMP1P03956 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
MMP1P03956 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
MMP1P03956 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
MMP1P03956 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
MMP1P03956 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
MMP1P03956 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
MMP1P03956 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MMP1P03956 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MMP1P03956 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MMP1P03956 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.36■■□□□ 1.81
MMP1P03956 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MMP1P03956 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
MMP1P03956 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MMP1P03956 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
MMP1P03956 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MMP1P03956 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MMP1P03956 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MMP1P03956 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
MMP1P03956 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.35■■□□□ 1.81
MMP1P03956 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
MMP1P03956 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
MMP1P03956 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
MMP1P03956 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
MMP1P03956 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
MMP1P03956 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MMP1P03956 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.34■■□□□ 1.81
MMP1P03956 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
MMP1P03956 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MMP1P03956 AC004448.1-201ENST00000458332 883 ntBASIC26.34■■□□□ 1.81
MMP1P03956 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
MMP1P03956 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
MMP1P03956 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.33■■□□□ 1.81
MMP1P03956 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
MMP1P03956 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
MMP1P03956 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
MMP1P03956 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.32■■□□□ 1.8
MMP1P03956 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
MMP1P03956 ALDH1A3-203ENST00000557963 1670 ntBASIC26.32■■□□□ 1.8
MMP1P03956 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
MMP1P03956 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
MMP1P03956 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MMP1P03956 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.32■■□□□ 1.8
MMP1P03956 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.32■■□□□ 1.8
MMP1P03956 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MMP1P03956 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.31■■□□□ 1.8
MMP1P03956 AL356441.2-201ENST00000443009 864 ntBASIC26.31■■□□□ 1.8
MMP1P03956 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.31■■□□□ 1.8
MMP1P03956 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.31■■□□□ 1.8
MMP1P03956 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.31■■□□□ 1.8
MMP1P03956 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.31■■□□□ 1.8
MMP1P03956 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
MMP1P03956 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
MMP1P03956 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.3■■□□□ 1.8
MMP1P03956 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
MMP1P03956 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
MMP1P03956 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
MMP1P03956 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
MMP1P03956 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
MMP1P03956 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
MMP1P03956 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
MMP1P03956 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
MMP1P03956 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MMP1P03956 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MMP1P03956 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
MMP1P03956 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MMP1P03956 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MMP1P03956 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.29■■□□□ 1.8
MMP1P03956 SNX5-217ENST00000606557 1087 ntBASIC26.29■■□□□ 1.8
MMP1P03956 AC021242.3-201ENST00000607598 1377 ntBASIC26.29■■□□□ 1.8
MMP1P03956 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.29■■□□□ 1.8
MMP1P03956 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MMP1P03956 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
MMP1P03956 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP1P03956 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP1P03956 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP1P03956 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP1P03956 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP1P03956 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.28■■□□□ 1.8
MMP1P03956 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.28■■□□□ 1.8
MMP1P03956 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MMP1P03956 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MMP1P03956 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MMP1P03956 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms