Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.93■□□□□ 0.94
SPTA1P02549 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPTA1P02549 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTA1P02549 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.93■□□□□ 0.94
SPTA1P02549 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTA1P02549 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTA1P02549 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTA1P02549 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTA1P02549 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SPTA1P02549 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPTA1P02549 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.92■□□□□ 0.94
SPTA1P02549 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPTA1P02549 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPTA1P02549 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.91■□□□□ 0.94
SPTA1P02549 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPTA1P02549 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.91■□□□□ 0.94
SPTA1P02549 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SPTA1P02549 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTA1P02549 RAP2CP1-201ENST00000605103 478 ntBASIC20.9■□□□□ 0.94
SPTA1P02549 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SPTA1P02549 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.9■□□□□ 0.94
SPTA1P02549 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTA1P02549 MIR3181-201ENST00000578512 73 ntBASIC20.9■□□□□ 0.94
SPTA1P02549 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.9■□□□□ 0.94
SPTA1P02549 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.9■□□□□ 0.94
SPTA1P02549 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPTA1P02549 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.9■□□□□ 0.94
SPTA1P02549 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.89■□□□□ 0.94
SPTA1P02549 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.89■□□□□ 0.94
SPTA1P02549 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SPTA1P02549 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTA1P02549 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTA1P02549 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.89■□□□□ 0.93
SPTA1P02549 AC027612.3-201ENST00000413684 1047 ntBASIC20.89■□□□□ 0.93
SPTA1P02549 AC004911.1-201ENST00000416316 871 ntBASIC20.89■□□□□ 0.93
SPTA1P02549 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.89■□□□□ 0.93
SPTA1P02549 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.89■□□□□ 0.93
SPTA1P02549 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTA1P02549 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTA1P02549 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTA1P02549 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SPTA1P02549 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTA1P02549 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTA1P02549 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.88■□□□□ 0.93
SPTA1P02549 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTA1P02549 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTA1P02549 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTA1P02549 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTA1P02549 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTA1P02549 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.88■□□□□ 0.93
SPTA1P02549 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.87■□□□□ 0.93
SPTA1P02549 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SPTA1P02549 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.87■□□□□ 0.93
SPTA1P02549 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.87■□□□□ 0.93
SPTA1P02549 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTA1P02549 AC097639.1-201ENST00000565519 1891 ntBASIC20.87■□□□□ 0.93
SPTA1P02549 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTA1P02549 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.87■□□□□ 0.93
SPTA1P02549 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.87■□□□□ 0.93
SPTA1P02549 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.87■□□□□ 0.93
SPTA1P02549 TERF1P2-201ENST00000583350 1212 ntBASIC20.87■□□□□ 0.93
SPTA1P02549 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTA1P02549 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SPTA1P02549 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTA1P02549 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTA1P02549 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTA1P02549 TMEM191A-211ENST00000637163 1067 ntBASIC20.86■□□□□ 0.93
SPTA1P02549 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SPTA1P02549 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.86■□□□□ 0.93
SPTA1P02549 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.86■□□□□ 0.93
SPTA1P02549 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTA1P02549 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTA1P02549 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SPTA1P02549 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.85■□□□□ 0.93
SPTA1P02549 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTA1P02549 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.85■□□□□ 0.93
SPTA1P02549 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTA1P02549 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTA1P02549 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTA1P02549 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
SPTA1P02549 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.84■□□□□ 0.93
SPTA1P02549 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTA1P02549 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.84■□□□□ 0.93
SPTA1P02549 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTA1P02549 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPTA1P02549 AC093827.2-201ENST00000512654 315 ntBASIC20.84■□□□□ 0.93
SPTA1P02549 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SPTA1P02549 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPTA1P02549 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.83■□□□□ 0.92
SPTA1P02549 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SPTA1P02549 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SPTA1P02549 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SPTA1P02549 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.83■□□□□ 0.92
SPTA1P02549 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SPTA1P02549 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
SPTA1P02549 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTA1P02549 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SPTA1P02549 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPTA1P02549 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SPTA1P02549 CCDC92B-201ENST00000575506 885 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms