Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.47■■□□□ 1.03
CLPTM1O96005 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1O96005 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1O96005 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.47■■□□□ 1.03
CLPTM1O96005 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1O96005 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CLPTM1O96005 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1O96005 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CLPTM1O96005 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1O96005 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.47■■□□□ 1.03
CLPTM1O96005 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.47■■□□□ 1.03
CLPTM1O96005 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1O96005 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CLPTM1O96005 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1O96005 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1O96005 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1O96005 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1O96005 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1O96005 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CLPTM1O96005 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CLPTM1O96005 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1O96005 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1O96005 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1O96005 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1O96005 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1O96005 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CLPTM1O96005 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1O96005 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1O96005 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1O96005 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1O96005 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CLPTM1O96005 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.44■■□□□ 1.02
CLPTM1O96005 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1O96005 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.44■■□□□ 1.02
CLPTM1O96005 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
CLPTM1O96005 ECEL1P1-201ENST00000373592 1742 ntBASIC21.44■■□□□ 1.02
CLPTM1O96005 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1O96005 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CLPTM1O96005 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1O96005 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1O96005 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1O96005 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.44■■□□□ 1.02
CLPTM1O96005 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLPTM1O96005 DUSP8P3-201ENST00000399571 1760 ntBASIC21.43■■□□□ 1.02
CLPTM1O96005 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLPTM1O96005 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLPTM1O96005 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLPTM1O96005 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CLPTM1O96005 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.43■■□□□ 1.02
CLPTM1O96005 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLPTM1O96005 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLPTM1O96005 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CLPTM1O96005 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLPTM1O96005 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLPTM1O96005 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLPTM1O96005 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLPTM1O96005 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLPTM1O96005 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLPTM1O96005 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.42■■□□□ 1.02
CLPTM1O96005 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.42■■□□□ 1.02
CLPTM1O96005 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLPTM1O96005 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLPTM1O96005 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLPTM1O96005 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.41■■□□□ 1.02
CLPTM1O96005 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CLPTM1O96005 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CLPTM1O96005 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.41■■□□□ 1.02
CLPTM1O96005 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLPTM1O96005 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.41■■□□□ 1.02
CLPTM1O96005 AC022413.1-201ENST00000624602 984 ntBASIC21.41■■□□□ 1.02
CLPTM1O96005 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLPTM1O96005 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CLPTM1O96005 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLPTM1O96005 GPX1-201ENST00000419349 1106 ntBASIC21.4■■□□□ 1.02
CLPTM1O96005 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.4■■□□□ 1.02
CLPTM1O96005 HSD17B1P1-201ENST00000590052 955 ntBASIC21.4■■□□□ 1.02
CLPTM1O96005 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLPTM1O96005 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.4■■□□□ 1.02
CLPTM1O96005 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.4■■□□□ 1.02
CLPTM1O96005 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLPTM1O96005 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLPTM1O96005 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLPTM1O96005 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLPTM1O96005 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLPTM1O96005 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLPTM1O96005 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CLPTM1O96005 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLPTM1O96005 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CLPTM1O96005 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.39■■□□□ 1.01
CLPTM1O96005 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.39■■□□□ 1.01
CLPTM1O96005 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLPTM1O96005 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLPTM1O96005 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.39■■□□□ 1.01
CLPTM1O96005 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.39■■□□□ 1.01
CLPTM1O96005 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.39■■□□□ 1.01
CLPTM1O96005 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.39■■□□□ 1.01
CLPTM1O96005 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.38■■□□□ 1.01
CLPTM1O96005 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLPTM1O96005 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CLPTM1O96005 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms