Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN1O60925 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.58■□□□□ 0.89
PFDN1O60925 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.58■□□□□ 0.88
PFDN1O60925 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN1O60925 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN1O60925 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN1O60925 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN1O60925 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.58■□□□□ 0.88
PFDN1O60925 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PFDN1O60925 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN1O60925 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.57■□□□□ 0.88
PFDN1O60925 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PFDN1O60925 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN1O60925 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN1O60925 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN1O60925 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
PFDN1O60925 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PFDN1O60925 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN1O60925 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
PFDN1O60925 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN1O60925 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN1O60925 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN1O60925 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN1O60925 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN1O60925 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN1O60925 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN1O60925 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PFDN1O60925 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN1O60925 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN1O60925 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN1O60925 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PFDN1O60925 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN1O60925 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN1O60925 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.55■□□□□ 0.88
PFDN1O60925 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PFDN1O60925 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PFDN1O60925 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PFDN1O60925 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.55■□□□□ 0.88
PFDN1O60925 AC127502.1-201ENST00000399971 1502 ntBASIC20.55■□□□□ 0.88
PFDN1O60925 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.55■□□□□ 0.88
PFDN1O60925 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PFDN1O60925 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.55■□□□□ 0.88
PFDN1O60925 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PFDN1O60925 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PFDN1O60925 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PFDN1O60925 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 AC138932.1-201ENST00000534164 6830 ntBASIC20.54■□□□□ 0.88
PFDN1O60925 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PFDN1O60925 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.54■□□□□ 0.88
PFDN1O60925 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PFDN1O60925 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PFDN1O60925 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PFDN1O60925 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PFDN1O60925 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PFDN1O60925 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PFDN1O60925 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PFDN1O60925 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.53■□□□□ 0.88
PFDN1O60925 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.53■□□□□ 0.88
PFDN1O60925 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PFDN1O60925 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.52■□□□□ 0.88
PFDN1O60925 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.52■□□□□ 0.88
PFDN1O60925 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PFDN1O60925 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PFDN1O60925 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PFDN1O60925 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PFDN1O60925 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PFDN1O60925 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PFDN1O60925 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PFDN1O60925 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.52■□□□□ 0.87
PFDN1O60925 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.52■□□□□ 0.87
PFDN1O60925 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PFDN1O60925 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PFDN1O60925 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.51■□□□□ 0.87
PFDN1O60925 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PFDN1O60925 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.51■□□□□ 0.87
PFDN1O60925 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PFDN1O60925 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PFDN1O60925 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.5■□□□□ 0.87
PFDN1O60925 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms