Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH2D1AO60880 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH2D1AO60880 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH2D1AO60880 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH2D1AO60880 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.08■□□□□ 0.32
SH2D1AO60880 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH2D1AO60880 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH2D1AO60880 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.08■□□□□ 0.32
SH2D1AO60880 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SH2D1AO60880 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.08■□□□□ 0.32
SH2D1AO60880 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH2D1AO60880 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SH2D1AO60880 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SH2D1AO60880 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH2D1AO60880 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH2D1AO60880 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH2D1AO60880 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH2D1AO60880 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.07■□□□□ 0.32
SH2D1AO60880 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.07■□□□□ 0.32
SH2D1AO60880 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SH2D1AO60880 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SH2D1AO60880 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SH2D1AO60880 ABHD17AP4-201ENST00000411545 909 ntBASIC17.07■□□□□ 0.32
SH2D1AO60880 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SH2D1AO60880 DUSP8P3-201ENST00000399571 1760 ntBASIC17.07■□□□□ 0.32
SH2D1AO60880 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.07■□□□□ 0.32
SH2D1AO60880 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH2D1AO60880 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH2D1AO60880 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SH2D1AO60880 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.07■□□□□ 0.32
SH2D1AO60880 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SH2D1AO60880 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH2D1AO60880 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH2D1AO60880 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.06■□□□□ 0.32
SH2D1AO60880 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH2D1AO60880 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH2D1AO60880 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH2D1AO60880 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.06■□□□□ 0.32
SH2D1AO60880 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.06■□□□□ 0.32
SH2D1AO60880 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH2D1AO60880 PKD1P6-201ENST00000343738 4769 ntBASIC17.06■□□□□ 0.32
SH2D1AO60880 AC092068.2-201ENST00000590491 1708 ntBASIC17.06■□□□□ 0.32
SH2D1AO60880 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH2D1AO60880 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH2D1AO60880 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SH2D1AO60880 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH2D1AO60880 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH2D1AO60880 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH2D1AO60880 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH2D1AO60880 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH2D1AO60880 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SH2D1AO60880 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.05■□□□□ 0.32
SH2D1AO60880 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH2D1AO60880 C1orf229-201ENST00000623686 2258 ntBASIC17.05■□□□□ 0.32
SH2D1AO60880 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SH2D1AO60880 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.05■□□□□ 0.32
SH2D1AO60880 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SH2D1AO60880 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH2D1AO60880 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH2D1AO60880 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SH2D1AO60880 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SH2D1AO60880 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SH2D1AO60880 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH2D1AO60880 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH2D1AO60880 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH2D1AO60880 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH2D1AO60880 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SH2D1AO60880 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SH2D1AO60880 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.03■□□□□ 0.32
SH2D1AO60880 LINC00565-201ENST00000562710 2331 ntBASIC17.03■□□□□ 0.32
SH2D1AO60880 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.03■□□□□ 0.32
SH2D1AO60880 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SH2D1AO60880 AC007029.1-201ENST00000604183 313 ntBASIC17.03■□□□□ 0.32
SH2D1AO60880 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.03■□□□□ 0.32
SH2D1AO60880 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH2D1AO60880 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SH2D1AO60880 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH2D1AO60880 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH2D1AO60880 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH2D1AO60880 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SH2D1AO60880 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SH2D1AO60880 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SH2D1AO60880 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SH2D1AO60880 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SH2D1AO60880 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SH2D1AO60880 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.01■□□□□ 0.31
SH2D1AO60880 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH2D1AO60880 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SH2D1AO60880 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms