Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.33■■□□□ 1.49
TBC1D4O60343 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TBC1D4O60343 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.33■■□□□ 1.49
TBC1D4O60343 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TBC1D4O60343 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TBC1D4O60343 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
TBC1D4O60343 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.32■■□□□ 1.48
TBC1D4O60343 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TBC1D4O60343 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.32■■□□□ 1.48
TBC1D4O60343 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.32■■□□□ 1.48
TBC1D4O60343 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TBC1D4O60343 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.32■■□□□ 1.48
TBC1D4O60343 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TBC1D4O60343 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TBC1D4O60343 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TBC1D4O60343 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TBC1D4O60343 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.31■■□□□ 1.48
TBC1D4O60343 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.31■■□□□ 1.48
TBC1D4O60343 AL136162.1-201ENST00000607711 1078 ntBASIC24.31■■□□□ 1.48
TBC1D4O60343 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.31■■□□□ 1.48
TBC1D4O60343 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TBC1D4O60343 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TBC1D4O60343 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TBC1D4O60343 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TBC1D4O60343 AL161729.1-201ENST00000604104 1402 ntBASIC24.3■■□□□ 1.48
TBC1D4O60343 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
TBC1D4O60343 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.3■■□□□ 1.48
TBC1D4O60343 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TBC1D4O60343 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
TBC1D4O60343 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TBC1D4O60343 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.3■■□□□ 1.48
TBC1D4O60343 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TBC1D4O60343 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
TBC1D4O60343 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TBC1D4O60343 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TBC1D4O60343 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TBC1D4O60343 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TBC1D4O60343 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TBC1D4O60343 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TBC1D4O60343 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TBC1D4O60343 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TBC1D4O60343 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.28■■□□□ 1.48
TBC1D4O60343 AC009102.2-201ENST00000606772 1639 ntBASIC24.28■■□□□ 1.48
TBC1D4O60343 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TBC1D4O60343 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TBC1D4O60343 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
TBC1D4O60343 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.28■■□□□ 1.48
TBC1D4O60343 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TBC1D4O60343 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.28■■□□□ 1.48
TBC1D4O60343 SUDS3P1-201ENST00000505831 966 ntBASIC24.28■■□□□ 1.48
TBC1D4O60343 AC024257.2-201ENST00000549699 147 ntBASIC24.28■■□□□ 1.48
TBC1D4O60343 AC135279.3-201ENST00000610945 1311 ntBASIC24.28■■□□□ 1.48
TBC1D4O60343 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
TBC1D4O60343 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TBC1D4O60343 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TBC1D4O60343 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.27■■□□□ 1.48
TBC1D4O60343 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.27■■□□□ 1.48
TBC1D4O60343 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TBC1D4O60343 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.27■■□□□ 1.48
TBC1D4O60343 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TBC1D4O60343 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.27■■□□□ 1.48
TBC1D4O60343 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
TBC1D4O60343 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
TBC1D4O60343 AC022211.4-201ENST00000625094 2161 ntBASIC24.26■■□□□ 1.47
TBC1D4O60343 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.26■■□□□ 1.47
TBC1D4O60343 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.26■■□□□ 1.47
TBC1D4O60343 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.26■■□□□ 1.47
TBC1D4O60343 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TBC1D4O60343 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D4O60343 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.25■■□□□ 1.47
TBC1D4O60343 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D4O60343 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
TBC1D4O60343 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.25■■□□□ 1.47
TBC1D4O60343 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D4O60343 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.25■■□□□ 1.47
TBC1D4O60343 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D4O60343 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TBC1D4O60343 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TBC1D4O60343 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
TBC1D4O60343 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.24■■□□□ 1.47
TBC1D4O60343 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TBC1D4O60343 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.24■■□□□ 1.47
TBC1D4O60343 DUX4L19-201ENST00000557448 1267 ntBASIC24.24■■□□□ 1.47
TBC1D4O60343 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.24■■□□□ 1.47
TBC1D4O60343 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TBC1D4O60343 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.24■■□□□ 1.47
TBC1D4O60343 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TBC1D4O60343 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TBC1D4O60343 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TBC1D4O60343 EDA-201ENST00000338901 1233 ntBASIC24.23■■□□□ 1.47
TBC1D4O60343 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TBC1D4O60343 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
TBC1D4O60343 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TBC1D4O60343 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TBC1D4O60343 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TBC1D4O60343 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TBC1D4O60343 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TBC1D4O60343 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.23■■□□□ 1.47
TBC1D4O60343 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.23■■□□□ 1.47
TBC1D4O60343 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms