Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 CAHM-201ENST00000604200 896 ntBASIC19.5■□□□□ 0.71
SSNA1O43805 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SSNA1O43805 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSNA1O43805 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SSNA1O43805 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SSNA1O43805 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.5■□□□□ 0.71
SSNA1O43805 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSNA1O43805 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSNA1O43805 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSNA1O43805 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSNA1O43805 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSNA1O43805 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SSNA1O43805 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSNA1O43805 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSNA1O43805 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSNA1O43805 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSNA1O43805 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.48■□□□□ 0.71
SSNA1O43805 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSNA1O43805 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.47■□□□□ 0.71
SSNA1O43805 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSNA1O43805 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSNA1O43805 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.47■□□□□ 0.71
SSNA1O43805 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSNA1O43805 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSNA1O43805 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSNA1O43805 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSNA1O43805 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SSNA1O43805 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSNA1O43805 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SSNA1O43805 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.47■□□□□ 0.71
SSNA1O43805 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.47■□□□□ 0.71
SSNA1O43805 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSNA1O43805 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSNA1O43805 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSNA1O43805 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SSNA1O43805 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSNA1O43805 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SSNA1O43805 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SSNA1O43805 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSNA1O43805 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SSNA1O43805 MIR6089-201ENST00000616698 64 ntBASIC19.46■□□□□ 0.71
SSNA1O43805 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.46■□□□□ 0.71
SSNA1O43805 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSNA1O43805 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSNA1O43805 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSNA1O43805 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SSNA1O43805 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SSNA1O43805 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSNA1O43805 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.45■□□□□ 0.7
SSNA1O43805 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSNA1O43805 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SSNA1O43805 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SSNA1O43805 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSNA1O43805 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.45■□□□□ 0.7
SSNA1O43805 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSNA1O43805 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSNA1O43805 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SSNA1O43805 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSNA1O43805 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.44■□□□□ 0.7
SSNA1O43805 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.44■□□□□ 0.7
SSNA1O43805 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSNA1O43805 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSNA1O43805 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSNA1O43805 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.44■□□□□ 0.7
SSNA1O43805 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SSNA1O43805 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.44■□□□□ 0.7
SSNA1O43805 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SSNA1O43805 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSNA1O43805 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSNA1O43805 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSNA1O43805 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSNA1O43805 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
SSNA1O43805 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSNA1O43805 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SSNA1O43805 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSNA1O43805 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSNA1O43805 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SSNA1O43805 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SSNA1O43805 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.42■□□□□ 0.7
SSNA1O43805 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSNA1O43805 HLA-L-211ENST00000482052 1765 ntBASIC19.42■□□□□ 0.7
SSNA1O43805 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
SSNA1O43805 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSNA1O43805 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSNA1O43805 DUSP8P3-201ENST00000399571 1760 ntBASIC19.42■□□□□ 0.7
SSNA1O43805 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSNA1O43805 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSNA1O43805 ANOS2P-203ENST00000472227 1816 ntBASIC19.41■□□□□ 0.7
SSNA1O43805 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.41■□□□□ 0.7
SSNA1O43805 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSNA1O43805 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSNA1O43805 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSNA1O43805 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSNA1O43805 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSNA1O43805 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSNA1O43805 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSNA1O43805 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSNA1O43805 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
SSNA1O43805 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSNA1O43805 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms