Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 BX664725.1-201ENST00000438252 379 ntBASIC20.4■□□□□ 0.86
TRAF3IP2O43734 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 AC021242.3-201ENST00000607598 1377 ntBASIC20.4■□□□□ 0.86
TRAF3IP2O43734 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAF3IP2O43734 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.39■□□□□ 0.86
TRAF3IP2O43734 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
TRAF3IP2O43734 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAF3IP2O43734 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAF3IP2O43734 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.39■□□□□ 0.86
TRAF3IP2O43734 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF3IP2O43734 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF3IP2O43734 AC009299.2-201ENST00000482477 511 ntBASIC20.39■□□□□ 0.85
TRAF3IP2O43734 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAF3IP2O43734 SNX5-217ENST00000606557 1087 ntBASIC20.39■□□□□ 0.85
TRAF3IP2O43734 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.39■□□□□ 0.85
TRAF3IP2O43734 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.39■□□□□ 0.85
TRAF3IP2O43734 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAF3IP2O43734 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.38■□□□□ 0.85
TRAF3IP2O43734 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAF3IP2O43734 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP2O43734 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP2O43734 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP2O43734 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP2O43734 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAF3IP2O43734 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 Z92544.1-202ENST00000571933 1220 ntBASIC20.37■□□□□ 0.85
TRAF3IP2O43734 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 ALDH1A3-203ENST00000557963 1670 ntBASIC20.37■□□□□ 0.85
TRAF3IP2O43734 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAF3IP2O43734 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAF3IP2O43734 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP2O43734 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP2O43734 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRAF3IP2O43734 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRAF3IP2O43734 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TRAF3IP2O43734 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.35■□□□□ 0.85
TRAF3IP2O43734 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TRAF3IP2O43734 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP2O43734 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAF3IP2O43734 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRAF3IP2O43734 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TRAF3IP2O43734 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAF3IP2O43734 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAF3IP2O43734 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAF3IP2O43734 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRAF3IP2O43734 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAF3IP2O43734 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
TRAF3IP2O43734 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRAF3IP2O43734 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.33■□□□□ 0.84
TRAF3IP2O43734 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRAF3IP2O43734 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAF3IP2O43734 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.33■□□□□ 0.84
TRAF3IP2O43734 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP2O43734 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP2O43734 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAF3IP2O43734 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRAF3IP2O43734 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRAF3IP2O43734 KRT125P-201ENST00000546827 989 ntBASIC20.32■□□□□ 0.84
TRAF3IP2O43734 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms