Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ACTN4O43707 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
ACTN4O43707 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ACTN4O43707 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ACTN4O43707 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.74■■□□□ 1.71
ACTN4O43707 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
ACTN4O43707 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.73■■□□□ 1.71
ACTN4O43707 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.73■■□□□ 1.71
ACTN4O43707 AC010980.1-201ENST00000587192 1142 ntBASIC25.73■■□□□ 1.71
ACTN4O43707 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ACTN4O43707 BHLHE23-202ENST00000612929 1109 ntBASIC25.73■■□□□ 1.71
ACTN4O43707 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ACTN4O43707 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ACTN4O43707 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.72■■□□□ 1.71
ACTN4O43707 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
ACTN4O43707 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ACTN4O43707 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ACTN4O43707 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ACTN4O43707 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
ACTN4O43707 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.72■■□□□ 1.71
ACTN4O43707 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.72■■□□□ 1.71
ACTN4O43707 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.72■■□□□ 1.71
ACTN4O43707 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
ACTN4O43707 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
ACTN4O43707 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.71■■□□□ 1.71
ACTN4O43707 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.71■■□□□ 1.71
ACTN4O43707 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ACTN4O43707 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ACTN4O43707 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.71■■□□□ 1.71
ACTN4O43707 AC074183.2-201ENST00000623112 922 ntBASIC25.71■■□□□ 1.71
ACTN4O43707 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
ACTN4O43707 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
ACTN4O43707 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
ACTN4O43707 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
ACTN4O43707 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
ACTN4O43707 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
ACTN4O43707 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
ACTN4O43707 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ACTN4O43707 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.69■■□□□ 1.7
ACTN4O43707 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ACTN4O43707 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
ACTN4O43707 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.69■■□□□ 1.7
ACTN4O43707 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ACTN4O43707 AF131216.4-201ENST00000638924 1588 ntBASIC25.69■■□□□ 1.7
ACTN4O43707 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.68■■□□□ 1.7
ACTN4O43707 ANOS2P-203ENST00000472227 1816 ntBASIC25.67■■□□□ 1.7
ACTN4O43707 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.67■■□□□ 1.7
ACTN4O43707 C9orf163-202ENST00000624034 2573 ntBASIC25.67■■□□□ 1.7
ACTN4O43707 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ACTN4O43707 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
ACTN4O43707 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
ACTN4O43707 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.67■■□□□ 1.7
ACTN4O43707 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
ACTN4O43707 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ACTN4O43707 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
ACTN4O43707 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.67■■□□□ 1.7
ACTN4O43707 AC012676.1-201ENST00000574705 1949 ntBASIC25.67■■□□□ 1.7
ACTN4O43707 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ACTN4O43707 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.66■■□□□ 1.7
ACTN4O43707 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
ACTN4O43707 KRT18P24-201ENST00000344739 1156 ntBASIC25.66■■□□□ 1.7
ACTN4O43707 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ACTN4O43707 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.66■■□□□ 1.7
ACTN4O43707 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
ACTN4O43707 MIR4281-201ENST00000580852 62 ntBASIC25.66■■□□□ 1.7
ACTN4O43707 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ACTN4O43707 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ACTN4O43707 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ACTN4O43707 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ACTN4O43707 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ACTN4O43707 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
ACTN4O43707 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
ACTN4O43707 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.65■■□□□ 1.7
ACTN4O43707 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.65■■□□□ 1.7
ACTN4O43707 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.65■■□□□ 1.7
ACTN4O43707 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.65■■□□□ 1.7
ACTN4O43707 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.65■■□□□ 1.7
ACTN4O43707 AC012354.3-201ENST00000623734 483 ntBASIC25.65■■□□□ 1.7
ACTN4O43707 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ACTN4O43707 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ACTN4O43707 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.65■■□□□ 1.7
ACTN4O43707 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ACTN4O43707 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ACTN4O43707 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ACTN4O43707 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ACTN4O43707 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ACTN4O43707 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ACTN4O43707 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.64■■□□□ 1.7
ACTN4O43707 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.64■■□□□ 1.7
ACTN4O43707 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ACTN4O43707 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
ACTN4O43707 AL033527.3-201ENST00000566366 1196 ntBASIC25.63■■□□□ 1.69
ACTN4O43707 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
ACTN4O43707 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
ACTN4O43707 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
ACTN4O43707 ALDH1A3-203ENST00000557963 1670 ntBASIC25.63■■□□□ 1.69
ACTN4O43707 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ACTN4O43707 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ACTN4O43707 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.63■■□□□ 1.69
ACTN4O43707 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms