Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.84■□□□□ 0.77
XRCC2O43543 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRCC2O43543 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC2O43543 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC2O43543 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC2O43543 AC131274.2-201ENST00000580697 1507 ntBASIC19.83■□□□□ 0.77
XRCC2O43543 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC2O43543 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC2O43543 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
XRCC2O43543 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC2O43543 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRCC2O43543 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
XRCC2O43543 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRCC2O43543 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRCC2O43543 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
XRCC2O43543 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRCC2O43543 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
XRCC2O43543 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
XRCC2O43543 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC2O43543 AC103834.1-201ENST00000520383 144 ntBASIC19.81■□□□□ 0.76
XRCC2O43543 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
XRCC2O43543 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.81■□□□□ 0.76
XRCC2O43543 KRT8P33-201ENST00000508125 1423 ntBASIC19.81■□□□□ 0.76
XRCC2O43543 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
XRCC2O43543 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC2O43543 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC2O43543 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC2O43543 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC2O43543 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC2O43543 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
XRCC2O43543 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC2O43543 AF131216.4-201ENST00000638924 1588 ntBASIC19.8■□□□□ 0.76
XRCC2O43543 AC133561.1-201ENST00000568600 2415 ntBASIC19.8■□□□□ 0.76
XRCC2O43543 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.8■□□□□ 0.76
XRCC2O43543 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
XRCC2O43543 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC2O43543 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC2O43543 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
XRCC2O43543 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC2O43543 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.79■□□□□ 0.76
XRCC2O43543 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC2O43543 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC2O43543 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC2O43543 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.79■□□□□ 0.76
XRCC2O43543 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC2O43543 AC103724.3-201ENST00000564481 992 ntBASIC19.79■□□□□ 0.76
XRCC2O43543 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.79■□□□□ 0.76
XRCC2O43543 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC2O43543 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
XRCC2O43543 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC2O43543 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC2O43543 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
XRCC2O43543 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC2O43543 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
XRCC2O43543 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.78■□□□□ 0.76
XRCC2O43543 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC2O43543 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
XRCC2O43543 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC2O43543 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
XRCC2O43543 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.77■□□□□ 0.76
XRCC2O43543 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
XRCC2O43543 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
XRCC2O43543 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.77■□□□□ 0.75
XRCC2O43543 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
XRCC2O43543 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
XRCC2O43543 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.76■□□□□ 0.75
XRCC2O43543 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC2O43543 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.76■□□□□ 0.75
XRCC2O43543 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.76■□□□□ 0.75
XRCC2O43543 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC2O43543 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC2O43543 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.76■□□□□ 0.75
XRCC2O43543 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.76■□□□□ 0.75
XRCC2O43543 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC2O43543 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
XRCC2O43543 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
XRCC2O43543 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC2O43543 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC2O43543 ALDH1A3-203ENST00000557963 1670 ntBASIC19.75■□□□□ 0.75
XRCC2O43543 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC2O43543 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.75■□□□□ 0.75
XRCC2O43543 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.75■□□□□ 0.75
XRCC2O43543 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.75■□□□□ 0.75
XRCC2O43543 AL031848.2-201ENST00000607670 837 ntBASIC19.75■□□□□ 0.75
XRCC2O43543 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC2O43543 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.75■□□□□ 0.75
XRCC2O43543 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.75■□□□□ 0.75
XRCC2O43543 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC2O43543 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
XRCC2O43543 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRCC2O43543 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms