Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH17O14917 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH17O14917 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH17O14917 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH17O14917 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH17O14917 LINC00543-201ENST00000567234 1845 ntBASIC21.79■■□□□ 1.08
PCDH17O14917 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDH17O14917 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH17O14917 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDH17O14917 AC010997.5-201ENST00000609182 354 ntBASIC21.79■■□□□ 1.08
PCDH17O14917 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDH17O14917 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDH17O14917 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH17O14917 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH17O14917 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH17O14917 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH17O14917 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCDH17O14917 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDH17O14917 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH17O14917 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDH17O14917 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH17O14917 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH17O14917 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH17O14917 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDH17O14917 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH17O14917 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
PCDH17O14917 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH17O14917 MIR6724-1-201ENST00000616420 92 ntBASIC21.77■■□□□ 1.08
PCDH17O14917 MIR6724-2-201ENST00000616483 92 ntBASIC21.77■■□□□ 1.08
PCDH17O14917 MIR6724-4-201ENST00000617390 92 ntBASIC21.77■■□□□ 1.08
PCDH17O14917 MIR6724-3-201ENST00000622482 92 ntBASIC21.77■■□□□ 1.08
PCDH17O14917 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH17O14917 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDH17O14917 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDH17O14917 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDH17O14917 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH17O14917 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH17O14917 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH17O14917 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH17O14917 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDH17O14917 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH17O14917 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
PCDH17O14917 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.76■■□□□ 1.07
PCDH17O14917 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH17O14917 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDH17O14917 MIR6089-201ENST00000616698 64 ntBASIC21.76■■□□□ 1.07
PCDH17O14917 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDH17O14917 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDH17O14917 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH17O14917 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH17O14917 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH17O14917 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDH17O14917 MIR6722-201ENST00000617286 78 ntBASIC21.75■■□□□ 1.07
PCDH17O14917 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH17O14917 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH17O14917 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH17O14917 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH17O14917 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH17O14917 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH17O14917 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDH17O14917 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH17O14917 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.74■■□□□ 1.07
PCDH17O14917 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH17O14917 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH17O14917 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH17O14917 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH17O14917 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH17O14917 AC133561.1-201ENST00000568600 2415 ntBASIC21.73■■□□□ 1.07
PCDH17O14917 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH17O14917 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH17O14917 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PCDH17O14917 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDH17O14917 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH17O14917 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH17O14917 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH17O14917 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDH17O14917 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDH17O14917 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
PCDH17O14917 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH17O14917 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDH17O14917 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH17O14917 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH17O14917 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH17O14917 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH17O14917 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH17O14917 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.72■■□□□ 1.07
PCDH17O14917 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PCDH17O14917 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH17O14917 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH17O14917 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH17O14917 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
PCDH17O14917 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PCDH17O14917 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH17O14917 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDH17O14917 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH17O14917 SNX5-217ENST00000606557 1087 ntBASIC21.71■■□□□ 1.07
PCDH17O14917 AC008406.3-201ENST00000620001 1374 ntBASIC21.71■■□□□ 1.07
PCDH17O14917 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDH17O14917 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDH17O14917 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms