Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NTN3O00634 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.96■■□□□ 1.11
NTN3O00634 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.96■■□□□ 1.11
NTN3O00634 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.96■■□□□ 1.11
NTN3O00634 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.96■■□□□ 1.11
NTN3O00634 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NTN3O00634 AC241377.3-202ENST00000626088 1088 ntBASIC21.96■■□□□ 1.11
NTN3O00634 AC241585.3-202ENST00000628937 1088 ntBASIC21.96■■□□□ 1.11
NTN3O00634 AC245100.8-202ENST00000629247 1058 ntBASIC21.96■■□□□ 1.11
NTN3O00634 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NTN3O00634 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NTN3O00634 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.95■■□□□ 1.1
NTN3O00634 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
NTN3O00634 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.95■■□□□ 1.1
NTN3O00634 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NTN3O00634 AC104564.3-201ENST00000582367 638 ntBASIC21.95■■□□□ 1.1
NTN3O00634 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NTN3O00634 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NTN3O00634 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NTN3O00634 AC097381.1-201ENST00000429019 1296 ntBASIC21.94■■□□□ 1.1
NTN3O00634 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NTN3O00634 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.94■■□□□ 1.1
NTN3O00634 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NTN3O00634 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NTN3O00634 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NTN3O00634 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NTN3O00634 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.93■■□□□ 1.1
NTN3O00634 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NTN3O00634 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NTN3O00634 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NTN3O00634 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NTN3O00634 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.93■■□□□ 1.1
NTN3O00634 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NTN3O00634 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NTN3O00634 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.93■■□□□ 1.1
NTN3O00634 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.93■■□□□ 1.1
NTN3O00634 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.93■■□□□ 1.1
NTN3O00634 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.93■■□□□ 1.1
NTN3O00634 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
NTN3O00634 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
NTN3O00634 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.92■■□□□ 1.1
NTN3O00634 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.92■■□□□ 1.1
NTN3O00634 AC008764.7-201ENST00000593779 1081 ntBASIC21.92■■□□□ 1.1
NTN3O00634 AC136469.2-201ENST00000623944 1028 ntBASIC21.92■■□□□ 1.1
NTN3O00634 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NTN3O00634 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.91■■□□□ 1.1
NTN3O00634 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NTN3O00634 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NTN3O00634 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NTN3O00634 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NTN3O00634 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NTN3O00634 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NTN3O00634 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NTN3O00634 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NTN3O00634 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NTN3O00634 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.91■■□□□ 1.1
NTN3O00634 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.91■■□□□ 1.1
NTN3O00634 AC091060.1-201ENST00000623524 1766 ntBASIC21.91■■□□□ 1.1
NTN3O00634 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.91■■□□□ 1.1
NTN3O00634 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.91■■□□□ 1.1
NTN3O00634 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.91■■□□□ 1.1
NTN3O00634 AL161729.1-201ENST00000604104 1402 ntBASIC21.9■■□□□ 1.1
NTN3O00634 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NTN3O00634 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NTN3O00634 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NTN3O00634 AC099791.1-201ENST00000416440 715 ntBASIC21.9■■□□□ 1.1
NTN3O00634 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.9■■□□□ 1.1
NTN3O00634 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NTN3O00634 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NTN3O00634 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NTN3O00634 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
NTN3O00634 AC145676.1-201ENST00000514988 2004 ntBASIC21.9■■□□□ 1.1
NTN3O00634 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NTN3O00634 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.9■■□□□ 1.1
NTN3O00634 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NTN3O00634 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
NTN3O00634 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NTN3O00634 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.89■■□□□ 1.09
NTN3O00634 AC006455.2-201ENST00000429931 906 ntBASIC21.89■■□□□ 1.09
NTN3O00634 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NTN3O00634 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.89■■□□□ 1.09
NTN3O00634 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
NTN3O00634 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NTN3O00634 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NTN3O00634 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NTN3O00634 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.88■■□□□ 1.09
NTN3O00634 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NTN3O00634 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms