Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PIK3C2AO00443 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PIK3C2AO00443 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
PIK3C2AO00443 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
PIK3C2AO00443 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PIK3C2AO00443 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.18■■■□□ 2.58
PIK3C2AO00443 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
PIK3C2AO00443 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.17■■■□□ 2.58
PIK3C2AO00443 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.17■■■□□ 2.58
PIK3C2AO00443 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31.17■■■□□ 2.58
PIK3C2AO00443 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.17■■■□□ 2.58
PIK3C2AO00443 AL138724.1-201ENST00000606771 1088 ntBASIC31.17■■■□□ 2.58
PIK3C2AO00443 AC092171.4-201ENST00000609130 632 ntBASIC31.17■■■□□ 2.58
PIK3C2AO00443 MIR6821-201ENST00000617625 74 ntBASIC31.17■■■□□ 2.58
PIK3C2AO00443 AC136469.2-201ENST00000623944 1028 ntBASIC31.17■■■□□ 2.58
PIK3C2AO00443 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PIK3C2AO00443 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.17■■■□□ 2.58
PIK3C2AO00443 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
PIK3C2AO00443 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
PIK3C2AO00443 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PIK3C2AO00443 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PIK3C2AO00443 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PIK3C2AO00443 AC092666.2-201ENST00000613287 246 ntBASIC31.16■■■□□ 2.58
PIK3C2AO00443 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.16■■■□□ 2.58
PIK3C2AO00443 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PIK3C2AO00443 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
PIK3C2AO00443 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PIK3C2AO00443 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PIK3C2AO00443 AC099791.1-201ENST00000416440 715 ntBASIC31.15■■■□□ 2.58
PIK3C2AO00443 AC097381.1-201ENST00000429019 1296 ntBASIC31.15■■■□□ 2.58
PIK3C2AO00443 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.15■■■□□ 2.58
PIK3C2AO00443 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.15■■■□□ 2.58
PIK3C2AO00443 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
PIK3C2AO00443 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PIK3C2AO00443 AL022069.1-201ENST00000568025 1636 ntBASIC31.14■■■□□ 2.58
PIK3C2AO00443 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PIK3C2AO00443 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PIK3C2AO00443 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PIK3C2AO00443 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
PIK3C2AO00443 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.13■■■□□ 2.57
PIK3C2AO00443 AC087623.3-201ENST00000607047 1098 ntBASIC31.13■■■□□ 2.57
PIK3C2AO00443 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PIK3C2AO00443 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
PIK3C2AO00443 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PIK3C2AO00443 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
PIK3C2AO00443 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
PIK3C2AO00443 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.13■■■□□ 2.57
PIK3C2AO00443 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
PIK3C2AO00443 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PIK3C2AO00443 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PIK3C2AO00443 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC31.12■■■□□ 2.57
PIK3C2AO00443 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PIK3C2AO00443 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.12■■■□□ 2.57
PIK3C2AO00443 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.12■■■□□ 2.57
PIK3C2AO00443 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
PIK3C2AO00443 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PIK3C2AO00443 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.11■■■□□ 2.57
PIK3C2AO00443 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.11■■■□□ 2.57
PIK3C2AO00443 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PIK3C2AO00443 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.1■■■□□ 2.57
PIK3C2AO00443 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.1■■■□□ 2.57
PIK3C2AO00443 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PIK3C2AO00443 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
PIK3C2AO00443 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.1■■■□□ 2.57
PIK3C2AO00443 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PIK3C2AO00443 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
PIK3C2AO00443 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PIK3C2AO00443 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PIK3C2AO00443 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PIK3C2AO00443 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PIK3C2AO00443 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PIK3C2AO00443 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.09■■■□□ 2.57
PIK3C2AO00443 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.09■■■□□ 2.57
PIK3C2AO00443 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
PIK3C2AO00443 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PIK3C2AO00443 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
PIK3C2AO00443 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PIK3C2AO00443 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.08■■■□□ 2.57
PIK3C2AO00443 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.08■■■□□ 2.57
PIK3C2AO00443 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.08■■■□□ 2.57
PIK3C2AO00443 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PIK3C2AO00443 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PIK3C2AO00443 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PIK3C2AO00443 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.57
PIK3C2AO00443 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PIK3C2AO00443 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.07■■■□□ 2.56
PIK3C2AO00443 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.07■■■□□ 2.56
PIK3C2AO00443 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PIK3C2AO00443 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PIK3C2AO00443 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PIK3C2AO00443 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PIK3C2AO00443 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.06■■■□□ 2.56
PIK3C2AO00443 AC008764.7-201ENST00000593779 1081 ntBASIC31.06■■■□□ 2.56
PIK3C2AO00443 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.06■■■□□ 2.56
PIK3C2AO00443 AC091060.1-201ENST00000623524 1766 ntBASIC31.06■■■□□ 2.56
PIK3C2AO00443 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PIK3C2AO00443 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PIK3C2AO00443 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.05■■■□□ 2.56
PIK3C2AO00443 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.05■■■□□ 2.56
PIK3C2AO00443 AC241377.3-202ENST00000626088 1088 ntBASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms