Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 NTF6A-201ENST00000591175 560 ntBASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 C9orf163-202ENST00000624034 2573 ntBASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF4LA6NMK7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF4LA6NMK7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF4LA6NMK7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF4LA6NMK7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.03■□□□□ 0.96
CPSF4LA6NMK7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.03■□□□□ 0.96
CPSF4LA6NMK7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.03■□□□□ 0.96
CPSF4LA6NMK7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF4LA6NMK7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF4LA6NMK7 AC012676.1-201ENST00000574705 1949 ntBASIC21.03■□□□□ 0.96
CPSF4LA6NMK7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF4LA6NMK7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 AL161729.1-201ENST00000604104 1402 ntBASIC21.02■□□□□ 0.96
CPSF4LA6NMK7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
CPSF4LA6NMK7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 AC011551.1-201ENST00000614101 683 ntBASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.01■□□□□ 0.95
CPSF4LA6NMK7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF4LA6NMK7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPSF4LA6NMK7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPSF4LA6NMK7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPSF4LA6NMK7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF4LA6NMK7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21■□□□□ 0.95
CPSF4LA6NMK7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CPSF4LA6NMK7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CPSF4LA6NMK7 AL022069.1-201ENST00000568025 1636 ntBASIC21■□□□□ 0.95
CPSF4LA6NMK7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21■□□□□ 0.95
CPSF4LA6NMK7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CPSF4LA6NMK7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF4LA6NMK7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.99■□□□□ 0.95
CPSF4LA6NMK7 BHLHE23-202ENST00000612929 1109 ntBASIC20.99■□□□□ 0.95
CPSF4LA6NMK7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
CPSF4LA6NMK7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF4LA6NMK7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPSF4LA6NMK7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPSF4LA6NMK7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 AC019171.1-201ENST00000601251 1056 ntBASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.97■□□□□ 0.95
CPSF4LA6NMK7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF4LA6NMK7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF4LA6NMK7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF4LA6NMK7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPSF4LA6NMK7 AC022616.5-201ENST00000518796 181 ntBASIC20.96■□□□□ 0.95
CPSF4LA6NMK7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.96■□□□□ 0.95
CPSF4LA6NMK7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.96■□□□□ 0.95
CPSF4LA6NMK7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms