Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01546A6NGU7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01546A6NGU7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC01546A6NGU7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01546A6NGU7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01546A6NGU7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01546A6NGU7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01546A6NGU7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC01546A6NGU7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01546A6NGU7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01546A6NGU7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01546A6NGU7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01546A6NGU7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01546A6NGU7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01546A6NGU7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01546A6NGU7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01546A6NGU7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LINC01546A6NGU7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01546A6NGU7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LINC01546A6NGU7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01546A6NGU7 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.27■□□□□ 0.19
LINC01546A6NGU7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01546A6NGU7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01546A6NGU7 AL161729.1-201ENST00000604104 1402 ntBASIC16.27■□□□□ 0.19
LINC01546A6NGU7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LINC01546A6NGU7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LINC01546A6NGU7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LINC01546A6NGU7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01546A6NGU7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01546A6NGU7 AC087741.3-201ENST00000624270 1347 ntBASIC16.26■□□□□ 0.19
LINC01546A6NGU7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01546A6NGU7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.26■□□□□ 0.19
LINC01546A6NGU7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01546A6NGU7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01546A6NGU7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC01546A6NGU7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01546A6NGU7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC01546A6NGU7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 C11orf96-202ENST00000528572 1834 ntBASIC16.24■□□□□ 0.19
LINC01546A6NGU7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01546A6NGU7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
LINC01546A6NGU7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 AC126177.7-201ENST00000547904 679 ntBASIC16.22■□□□□ 0.19
LINC01546A6NGU7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01546A6NGU7 AC092053.2-201ENST00000640557 1818 ntBASIC16.22■□□□□ 0.19
LINC01546A6NGU7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC01546A6NGU7 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC01546A6NGU7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01546A6NGU7 AC139530.1-201ENST00000575312 1977 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms