Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC27.13■■□□□ 1.93
SSC5DA1L4H1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
SSC5DA1L4H1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
SSC5DA1L4H1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.12■■□□□ 1.93
SSC5DA1L4H1 MIR6089-201ENST00000616698 64 ntBASIC27.12■■□□□ 1.93
SSC5DA1L4H1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SSC5DA1L4H1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SSC5DA1L4H1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.11■■□□□ 1.93
SSC5DA1L4H1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.11■■□□□ 1.93
SSC5DA1L4H1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC27.11■■□□□ 1.93
SSC5DA1L4H1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27.11■■□□□ 1.93
SSC5DA1L4H1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SSC5DA1L4H1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
SSC5DA1L4H1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SSC5DA1L4H1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SSC5DA1L4H1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SSC5DA1L4H1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SSC5DA1L4H1 AC090192.1-201ENST00000517740 490 ntBASIC27.09■■□□□ 1.93
SSC5DA1L4H1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
SSC5DA1L4H1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SSC5DA1L4H1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
SSC5DA1L4H1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.09■■□□□ 1.93
SSC5DA1L4H1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
SSC5DA1L4H1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
SSC5DA1L4H1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SSC5DA1L4H1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
SSC5DA1L4H1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
SSC5DA1L4H1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SSC5DA1L4H1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SSC5DA1L4H1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.08■■□□□ 1.93
SSC5DA1L4H1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.08■■□□□ 1.93
SSC5DA1L4H1 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.08■■□□□ 1.93
SSC5DA1L4H1 RARRES2P11-201ENST00000635158 484 ntBASIC27.08■■□□□ 1.93
SSC5DA1L4H1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.08■■□□□ 1.92
SSC5DA1L4H1 BX842568.3-201ENST00000418104 571 ntBASIC27.07■■□□□ 1.92
SSC5DA1L4H1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SSC5DA1L4H1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC27.07■■□□□ 1.92
SSC5DA1L4H1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.07■■□□□ 1.92
SSC5DA1L4H1 AC233992.3-201ENST00000607491 485 ntBASIC27.07■■□□□ 1.92
SSC5DA1L4H1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SSC5DA1L4H1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SSC5DA1L4H1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.07■■□□□ 1.92
SSC5DA1L4H1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.07■■□□□ 1.92
SSC5DA1L4H1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SSC5DA1L4H1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC27.06■■□□□ 1.92
SSC5DA1L4H1 KRT18P5-201ENST00000436075 1291 ntBASIC27.06■■□□□ 1.92
SSC5DA1L4H1 MIR3181-201ENST00000578512 73 ntBASIC27.06■■□□□ 1.92
SSC5DA1L4H1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SSC5DA1L4H1 AC241377.3-202ENST00000626088 1088 ntBASIC27.06■■□□□ 1.92
SSC5DA1L4H1 AC241585.3-202ENST00000628937 1088 ntBASIC27.06■■□□□ 1.92
SSC5DA1L4H1 AC245100.8-202ENST00000629247 1058 ntBASIC27.06■■□□□ 1.92
SSC5DA1L4H1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SSC5DA1L4H1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
SSC5DA1L4H1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SSC5DA1L4H1 AC092437.1-201ENST00000624794 1048 ntBASIC27.05■■□□□ 1.92
SSC5DA1L4H1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SSC5DA1L4H1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
SSC5DA1L4H1 SLC6A10P-202ENST00000431994 2058 ntBASIC27.05■■□□□ 1.92
SSC5DA1L4H1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
SSC5DA1L4H1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SSC5DA1L4H1 AC009086.3-201ENST00000623486 1008 ntBASIC27.05■■□□□ 1.92
SSC5DA1L4H1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
SSC5DA1L4H1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
SSC5DA1L4H1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
SSC5DA1L4H1 AC092803.2-201ENST00000564287 1899 ntBASIC27.04■■□□□ 1.92
SSC5DA1L4H1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
SSC5DA1L4H1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
SSC5DA1L4H1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SSC5DA1L4H1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.03■■□□□ 1.92
SSC5DA1L4H1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SSC5DA1L4H1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SSC5DA1L4H1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.03■■□□□ 1.92
SSC5DA1L4H1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SSC5DA1L4H1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.03■■□□□ 1.92
SSC5DA1L4H1 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.02■■□□□ 1.92
SSC5DA1L4H1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SSC5DA1L4H1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.02■■□□□ 1.92
SSC5DA1L4H1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SSC5DA1L4H1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
SSC5DA1L4H1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
SSC5DA1L4H1 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.01■■□□□ 1.92
SSC5DA1L4H1 AC034268.1-201ENST00000441047 882 ntBASIC27.01■■□□□ 1.92
SSC5DA1L4H1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.01■■□□□ 1.92
SSC5DA1L4H1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
SSC5DA1L4H1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SSC5DA1L4H1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.01■■□□□ 1.91
SSC5DA1L4H1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.01■■□□□ 1.91
SSC5DA1L4H1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.01■■□□□ 1.91
SSC5DA1L4H1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SSC5DA1L4H1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms