Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA3A0PJX4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.05■□□□□ 0.8
SHISA3A0PJX4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA3A0PJX4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA3A0PJX4 AC137767.1-201ENST00000602918 1920 ntBASIC20.05■□□□□ 0.8
SHISA3A0PJX4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SHISA3A0PJX4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SHISA3A0PJX4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA3A0PJX4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SHISA3A0PJX4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SHISA3A0PJX4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.04■□□□□ 0.8
SHISA3A0PJX4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SHISA3A0PJX4 AC127496.7-201ENST00000625110 1798 ntBASIC20.04■□□□□ 0.8
SHISA3A0PJX4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA3A0PJX4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.04■□□□□ 0.8
SHISA3A0PJX4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.04■□□□□ 0.8
SHISA3A0PJX4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.04■□□□□ 0.8
SHISA3A0PJX4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA3A0PJX4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SHISA3A0PJX4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SHISA3A0PJX4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA3A0PJX4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA3A0PJX4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA3A0PJX4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA3A0PJX4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA3A0PJX4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.03■□□□□ 0.8
SHISA3A0PJX4 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.03■□□□□ 0.8
SHISA3A0PJX4 SMPD5-203ENST00000639008 1464 ntBASIC20.03■□□□□ 0.8
SHISA3A0PJX4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA3A0PJX4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHISA3A0PJX4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA3A0PJX4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHISA3A0PJX4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.02■□□□□ 0.8
SHISA3A0PJX4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SHISA3A0PJX4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SHISA3A0PJX4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.02■□□□□ 0.8
SHISA3A0PJX4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.02■□□□□ 0.8
SHISA3A0PJX4 AL024507.2-201ENST00000606070 2574 ntBASIC20.02■□□□□ 0.8
SHISA3A0PJX4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SHISA3A0PJX4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHISA3A0PJX4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.02■□□□□ 0.79
SHISA3A0PJX4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.02■□□□□ 0.79
SHISA3A0PJX4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.02■□□□□ 0.79
SHISA3A0PJX4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA3A0PJX4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA3A0PJX4 ZNRF2P2-203ENST00000454624 420 ntBASIC20.01■□□□□ 0.79
SHISA3A0PJX4 AC060814.1-201ENST00000554326 538 ntBASIC20.01■□□□□ 0.79
SHISA3A0PJX4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.01■□□□□ 0.79
SHISA3A0PJX4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA3A0PJX4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA3A0PJX4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.01■□□□□ 0.79
SHISA3A0PJX4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA3A0PJX4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHISA3A0PJX4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SHISA3A0PJX4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHISA3A0PJX4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SHISA3A0PJX4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHISA3A0PJX4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHISA3A0PJX4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHISA3A0PJX4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20■□□□□ 0.79
SHISA3A0PJX4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHISA3A0PJX4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SHISA3A0PJX4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SHISA3A0PJX4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHISA3A0PJX4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHISA3A0PJX4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.98■□□□□ 0.79
SHISA3A0PJX4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SHISA3A0PJX4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHISA3A0PJX4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHISA3A0PJX4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.98■□□□□ 0.79
SHISA3A0PJX4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHISA3A0PJX4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHISA3A0PJX4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.98■□□□□ 0.79
SHISA3A0PJX4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.97■□□□□ 0.79
SHISA3A0PJX4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHISA3A0PJX4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms