Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C13orf42A0A1B0GVH6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C13orf42A0A1B0GVH6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.25■□□□□ 0.67
C13orf42A0A1B0GVH6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C13orf42A0A1B0GVH6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C13orf42A0A1B0GVH6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
C13orf42A0A1B0GVH6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C13orf42A0A1B0GVH6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C13orf42A0A1B0GVH6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
C13orf42A0A1B0GVH6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
C13orf42A0A1B0GVH6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
C13orf42A0A1B0GVH6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 GPX1-201ENST00000419349 1106 ntBASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C13orf42A0A1B0GVH6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 AC060814.1-201ENST00000554326 538 ntBASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
C13orf42A0A1B0GVH6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
C13orf42A0A1B0GVH6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C13orf42A0A1B0GVH6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C13orf42A0A1B0GVH6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C13orf42A0A1B0GVH6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C13orf42A0A1B0GVH6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C13orf42A0A1B0GVH6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
C13orf42A0A1B0GVH6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.19■□□□□ 0.66
C13orf42A0A1B0GVH6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
C13orf42A0A1B0GVH6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C13orf42A0A1B0GVH6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C13orf42A0A1B0GVH6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.18■□□□□ 0.66
C13orf42A0A1B0GVH6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 MIR6089-201ENST00000616698 64 ntBASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
C13orf42A0A1B0GVH6 HLA-L-211ENST00000482052 1765 ntBASIC19.16■□□□□ 0.66
C13orf42A0A1B0GVH6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C13orf42A0A1B0GVH6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C13orf42A0A1B0GVH6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
C13orf42A0A1B0GVH6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C13orf42A0A1B0GVH6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
C13orf42A0A1B0GVH6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C13orf42A0A1B0GVH6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms