Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 AC020928.2-201ENST00000588717 2197 ntBASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 AL161729.1-201ENST00000604104 1402 ntBASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPVL3A0A0U1RRI6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 AC096631.2-201ENST00000436136 790 ntBASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPVL3A0A0U1RRI6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 AC142381.3-201ENST00000568208 1670 ntBASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 SRD5A1P1-201ENST00000442297 786 ntBASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 AC110285.6-201ENST00000617652 491 ntBASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.6■□□□□ 0.57
CENPVL3A0A0U1RRI6 AC138932.3-201ENST00000567634 1902 ntBASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 MIR638-201ENST00000385237 100 ntBASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.59■□□□□ 0.57
CENPVL3A0A0U1RRI6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.58■□□□□ 0.57
CENPVL3A0A0U1RRI6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
CENPVL3A0A0U1RRI6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.58■□□□□ 0.57
CENPVL3A0A0U1RRI6 AC135731.1-201ENST00000569415 2548 ntBASIC18.58■□□□□ 0.57
CENPVL3A0A0U1RRI6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.58■□□□□ 0.56
CENPVL3A0A0U1RRI6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.58■□□□□ 0.56
CENPVL3A0A0U1RRI6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CENPVL3A0A0U1RRI6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CENPVL3A0A0U1RRI6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.58■□□□□ 0.56
CENPVL3A0A0U1RRI6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CENPVL3A0A0U1RRI6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.57■□□□□ 0.56
CENPVL3A0A0U1RRI6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CENPVL3A0A0U1RRI6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPVL3A0A0U1RRI6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPVL3A0A0U1RRI6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.56■□□□□ 0.56
CENPVL3A0A0U1RRI6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CENPVL3A0A0U1RRI6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPVL3A0A0U1RRI6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CENPVL3A0A0U1RRI6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CENPVL3A0A0U1RRI6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.55■□□□□ 0.56
CENPVL3A0A0U1RRI6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CENPVL3A0A0U1RRI6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms