Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ABHD17AP5-201ENST00000580133 923 ntBASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV10-1A0A0K0K1A3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 AC074183.2-201ENST00000623112 922 ntBASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV10-1A0A0K0K1A3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 NTF6A-201ENST00000591175 560 ntBASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 AC092068.2-201ENST00000590491 1708 ntBASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV10-1A0A0K0K1A3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV10-1A0A0K0K1A3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV10-1A0A0K0K1A3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV10-1A0A0K0K1A3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV10-1A0A0K0K1A3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ANOS2P-203ENST00000472227 1816 ntBASIC16.1■□□□□ 0.17
TRBV10-1A0A0K0K1A3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV10-1A0A0K0K1A3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
TRBV10-1A0A0K0K1A3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV10-1A0A0K0K1A3 ALDH1A3-203ENST00000557963 1670 ntBASIC16.08■□□□□ 0.17
TRBV10-1A0A0K0K1A3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV10-1A0A0K0K1A3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV10-1A0A0K0K1A3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV10-1A0A0K0K1A3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV10-1A0A0K0K1A3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV10-1A0A0K0K1A3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 AC133561.1-201ENST00000568600 2415 ntBASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 AC131274.2-201ENST00000580697 1507 ntBASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV10-1A0A0K0K1A3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms