Protein–RNA interactions for Protein: A0A0B4J2D9

IGKV1D-13, Immunoglobulin kappa variable 1D-13, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-13A0A0B4J2D9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.91■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 AL592295.1-201ENST00000400984 884 ntBASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV1D-13A0A0B4J2D9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 AC092068.2-201ENST00000590491 1708 ntBASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 DUSP8P3-201ENST00000399571 1760 ntBASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 DUX4L9-201ENST00000449051 1259 ntBASIC18.87■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.87■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.87■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 AL161729.1-201ENST00000604104 1402 ntBASIC18.87■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 MIR6765-201ENST00000614092 87 ntBASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 AL117328.2-201ENST00000624617 1940 ntBASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.86■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 AC233723.2-201ENST00000623798 2106 ntBASIC18.85■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.84■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
IGKV1D-13A0A0B4J2D9 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.83■□□□□ 0.6
IGKV1D-13A0A0B4J2D9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.83■□□□□ 0.6
IGKV1D-13A0A0B4J2D9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
IGKV1D-13A0A0B4J2D9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
IGKV1D-13A0A0B4J2D9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
IGKV1D-13A0A0B4J2D9 C1orf229-201ENST00000623686 2258 ntBASIC18.83■□□□□ 0.6
IGKV1D-13A0A0B4J2D9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
IGKV1D-13A0A0B4J2D9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
IGKV1D-13A0A0B4J2D9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV1D-13A0A0B4J2D9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms