Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV12-3A0A0B4J271 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV12-3A0A0B4J271 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 AC004987.1-201ENST00000428627 508 ntBASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 ATP5G2P3-201ENST00000429083 425 ntBASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV12-3A0A0B4J271 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 AC022616.5-201ENST00000518796 181 ntBASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 AC019171.1-201ENST00000601251 1056 ntBASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 AC011551.1-201ENST00000614101 683 ntBASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV12-3A0A0B4J271 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.3
TRAV12-3A0A0B4J271 DUSP8P5-201ENST00000422884 1815 ntBASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAV12-3A0A0B4J271 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 AL022069.1-201ENST00000568025 1636 ntBASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV12-3A0A0B4J271 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 TSPY13P-201ENST00000338964 914 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms