Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 PBX2P1-201ENST00000493219 1291 ntBASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 DUX4L19-201ENST00000557448 1267 ntBASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV10A0A0B4J240 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 CREM-210ENST00000374721 2020 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 AC005837.3-201ENST00000612163 286 ntBASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV10A0A0B4J240 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 UNC93B3-201ENST00000308076 687 ntBASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 AL136162.1-201ENST00000607711 1078 ntBASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 AC106739.1-201ENST00000617035 715 ntBASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV10A0A0B4J240 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV10A0A0B4J240 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 AC135279.3-201ENST00000610945 1311 ntBASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV10A0A0B4J240 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 MIR935-201ENST00000401179 91 ntBASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV10A0A0B4J240 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV10A0A0B4J240 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV10A0A0B4J240 AC142381.2-201ENST00000566120 298 ntBASIC16.08■□□□□ 0.16
TRAV10A0A0B4J240 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV10A0A0B4J240 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV10A0A0B4J240 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV10A0A0B4J240 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV10A0A0B4J240 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV10A0A0B4J240 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV10A0A0B4J240 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV10A0A0B4J240 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV10A0A0B4J240 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms