Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 AC007029.1-201ENST00000604183 313 ntBASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 AC022413.1-201ENST00000624602 984 ntBASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 C1orf229-201ENST00000623686 2258 ntBASIC17.33■□□□□ 0.37
TRAV8-1A0A0A6YYK1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-1A0A0A6YYK1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-1A0A0A6YYK1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-1A0A0A6YYK1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-1A0A0A6YYK1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV8-1A0A0A6YYK1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-1A0A0A6YYK1 LINC00565-201ENST00000562710 2331 ntBASIC17.31■□□□□ 0.36
TRAV8-1A0A0A6YYK1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAV8-1A0A0A6YYK1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-1A0A0A6YYK1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-1A0A0A6YYK1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAV8-1A0A0A6YYK1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-1A0A0A6YYK1 RAP2CP1-202ENST00000605179 643 ntBASIC17.31■□□□□ 0.36
TRAV8-1A0A0A6YYK1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRAV8-1A0A0A6YYK1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 KRT18P10-201ENST00000388836 1287 ntBASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-1A0A0A6YYK1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 AC026202.3-201ENST00000600805 1127 ntBASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV8-1A0A0A6YYK1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 DUSP8P3-201ENST00000399571 1760 ntBASIC17.28■□□□□ 0.36
TRAV8-1A0A0A6YYK1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-1A0A0A6YYK1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms