Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-2A0A087WT02 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-2A0A087WT02 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-2A0A087WT02 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRAV9-2A0A087WT02 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-2A0A087WT02 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRAV9-2A0A087WT02 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 AC060814.1-201ENST00000554326 538 ntBASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 AL137060.1-201ENST00000618151 2648 ntBASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV9-2A0A087WT02 AL359258.2-201ENST00000564063 1566 ntBASIC16.89■□□□□ 0.3
TRAV9-2A0A087WT02 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 RNF165-205ENST00000588679 2904 ntBASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 AC004812.2-201ENST00000611079 2094 ntBASIC16.89■□□□□ 0.29
TRAV9-2A0A087WT02 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-2A0A087WT02 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-2A0A087WT02 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-2A0A087WT02 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-2A0A087WT02 RARRES2P2-201ENST00000394842 485 ntBASIC16.87■□□□□ 0.29
TRAV9-2A0A087WT02 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-2A0A087WT02 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-2A0A087WT02 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-2A0A087WT02 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 ECEL1P2-201ENST00000461596 1295 ntBASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-2A0A087WT02 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-2A0A087WT02 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV9-2A0A087WT02 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms