Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV18A0A075B6X5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TRAV18A0A075B6X5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.63■□□□□ 0.73
TRAV18A0A075B6X5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV18A0A075B6X5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV18A0A075B6X5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRAV18A0A075B6X5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 MIR3648-2-201ENST00000581792 180 ntBASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 MIR3648-1-201ENST00000615959 180 ntBASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 DUSP8P3-201ENST00000399571 1760 ntBASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV18A0A075B6X5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 RP9P-202ENST00000450133 1212 ntBASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV18A0A075B6X5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 AC092068.2-201ENST00000590491 1708 ntBASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV18A0A075B6X5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
TRAV18A0A075B6X5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TRAV18A0A075B6X5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV18A0A075B6X5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.58■□□□□ 0.73
TRAV18A0A075B6X5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV18A0A075B6X5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV18A0A075B6X5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV18A0A075B6X5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAV18A0A075B6X5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV18A0A075B6X5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TRAV18A0A075B6X5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV18A0A075B6X5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 AC093536.1-201ENST00000569153 554 ntBASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAV18A0A075B6X5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TRAV18A0A075B6X5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV18A0A075B6X5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV18A0A075B6X5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
TRAV18A0A075B6X5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV18A0A075B6X5 LINC00526-201ENST00000581067 1875 ntBASIC19.56■□□□□ 0.72
TRAV18A0A075B6X5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRAV18A0A075B6X5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
TRAV18A0A075B6X5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV18A0A075B6X5 GUSBP5-202ENST00000510805 1989 ntBASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms