Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 CHMP1AP1-201ENST00000445563 662 ntBASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 RN7SL720P-201ENST00000488178 304 ntBASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 SAMD11P1-201ENST00000571429 661 ntBASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 AP001505.2-201ENST00000616815 443 ntBASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 AC100757.4-201ENST00000626934 759 ntBASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 AC063926.3-201ENST00000624734 5658 ntBASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHGA9Q9Y5G4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 GRK6P1-201ENST00000400595 1711 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 TUBBP5-203ENST00000508529 1334 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AC084364.1-201ENST00000551967 1556 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 HINT2P1-201ENST00000419438 481 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AC005740.2-201ENST00000511085 419 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AC106820.3-201ENST00000561653 397 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AP001002.3-201ENST00000623482 206 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AC232323.1-201ENST00000540724 2099 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AGAP7P-201ENST00000582299 2062 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 REXO1L5P-201ENST00000622260 2098 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 AGAP14-201ENST00000624701 2060 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 LINC00552-201ENST00000625151 2579 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 KRT8P4-201ENST00000509735 1454 ntBASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHGA9Q9Y5G4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms