Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AC105021.1-202ENST00000570572 669 ntBASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.16□□□□□ -0.14
AP4S1Q9Y587 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
AP4S1Q9Y587 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 AL023775.1-201ENST00000454907 1746 ntBASIC14.15□□□□□ -0.14
AP4S1Q9Y587 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 AL513190.1-201ENST00000621254 727 ntBASIC14.15□□□□□ -0.14
AP4S1Q9Y587 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 AC012313.10-201ENST00000623509 926 ntBASIC14.15□□□□□ -0.14
AP4S1Q9Y587 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.15□□□□□ -0.14
AP4S1Q9Y587 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
AP4S1Q9Y587 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
AP4S1Q9Y587 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms