Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
R3HCC1Q9Y3T6 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 AC004899.2-201ENST00000622993 3860 ntBASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 AL450472.2-201ENST00000603663 1156 ntBASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 AJ011932.1-201ENST00000621707 465 ntBASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
R3HCC1Q9Y3T6 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 AC127383.1-201ENST00000444697 1800 ntBASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
R3HCC1Q9Y3T6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.21■□□□□ 0.34
R3HCC1Q9Y3T6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.21■□□□□ 0.34
R3HCC1Q9Y3T6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
R3HCC1Q9Y3T6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.21■□□□□ 0.34
R3HCC1Q9Y3T6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
R3HCC1Q9Y3T6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.21■□□□□ 0.34
R3HCC1Q9Y3T6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms