Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF11Q9Y3C5 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 AC152010.1-201ENST00000415779 2006 ntBASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 SOCS2P1-201ENST00000417727 557 ntBASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 DUX4L47-201ENST00000566374 394 ntBASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 LINC02560-201ENST00000596379 459 ntBASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 TMEM261P1-201ENST00000604899 340 ntBASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 AL391825.1-201ENST00000457671 1364 ntBASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 TCAF1P1-201ENST00000414990 2232 ntBASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RNF11Q9Y3C5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF11Q9Y3C5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms