Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AC104109.2-201ENST00000602919 1418 ntBASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AL805961.2-201ENST00000642139 4817 ntBASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AC079140.1-201ENST00000508039 487 ntBASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AL662844.1-201ENST00000546340 181 ntBASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AC074044.1-201ENST00000609673 707 ntBASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AL354702.1-201ENST00000442006 1960 ntBASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AC027612.1-201ENST00000445234 2395 ntBASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AGGF1P1-201ENST00000509500 2073 ntBASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 TCAF1P1-201ENST00000414990 2232 ntBASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 RNA5SP416-201ENST00000516838 111 ntBASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 SLC25A39P2-201ENST00000537614 270 ntBASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AC034105.1-201ENST00000563488 319 ntBASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 MIR6069-201ENST00000620069 79 ntBASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AC084121.4-201ENST00000641598 221 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms